Sequence 1: | NP_611499.3 | Gene: | rig / 37335 | FlyBaseID: | FBgn0250850 | Length: | 1235 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004912843.1 | Gene: | gemin5 / 100493267 | XenbaseID: | XB-GENE-981572 | Length: | 1473 | Species: | Xenopus tropicalis |
Alignment Length: | 1153 | Identity: | 233/1153 - (20%) |
---|---|---|---|
Similarity: | 400/1153 - (34%) | Gaps: | 346/1153 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 CSPYNDNLFAVGTAMGNVLVCDLRKMNIVYKFHGHKAPICGLAWREVPAAEDEKTNNLALSAEE- 235
Fly 236 ------WRSRNGGQEEKPKTKPPPLTKSKAAESDDPFDIYNFDHLEYEFGAPIAERRRKSSEDCG 294
Fly 295 GEFVGLEKPAGAAVLDFVEACESVKAELLASRQEDKTQHVEVTLHDCEPTKPTGPLSDASTISNK 359
Fly 360 NDASDSTEGSLEVIQYSSSSDDAVIVDGEAAKPKREVLHHIY-HQAEVHA-SGTPQTKSEPQSNL 422
Fly 423 QVVPAISAETISLTSVNSTHLETL---------LVSIDGDEVMMIWNTNTGAHA---GKNYSKSK 475
Fly 476 TAG---KLNNVYWLNNH--------VIVSLSRHQLFFWSV--EFERKMLRYKISKDKSHSCHLQD 527
Fly 528 IVSFACDSSKEMIWLCRNNRQIGMMNPKTGRMADFYGTVAFG--VRAMAECPDDMNKIALGCSDR 590
Fly 591 RVAFFDISKLTTSCLPIDSVY--VSSNVYCLAWSPNCL-ELAFGTFDGTVGILDVERMKVKTHLR 652
Fly 653 TPHKKEVYSLVW------------QDHFIYFI-----------------------VNRVLGFFDL 682
Fly 683 RKSKIEPTIVNCISRPSYLSIRDSFLFVGTDDGLLQIHERDSGMEKSWSPFIRQSALFARYVTDI 747
Fly 748 AW------CPLDSNKFAVSG-NDRSVYVMEFQ-----PTE------RNWKTL--HTFTANTEKAS 792
Fly 793 ITSMRWSHTQKHLLLTFHIEGKVCLWNCNAPEKPPLTITYHCPMWCGMFLPTNENIIMCSGKALS 857
Fly 858 VELIDIKDALEGDEKSICPKVDALLNVKWA---SKSLTQPYAPVLTAAEKKRQRRDQRKAAAKLE 919
Fly 920 VDVANKDQ-KKIQ--ESVTAVIDNPTNDKCT-QETPVEEMLEALSLDKEQNNRSAKEC------- 973
Fly 974 ---PKCKEQSPDSFTHSRTCLYLTQKELNKSALEKLAIVLTEDSAKIDKSVLISKLFSSK----- 1030
Fly 1031 ---VMAKELIATELTNLKHSNTKDIAPLCL----AMSTFKLREELEQHIAN-------------- 1074
Fly 1075 ------------KTLTERHVSLAPSVSFTLWQDCCRAYAKQMEEKGYIMHAATYLFSQGMQSEAI 1127
Fly 1128 KLFLANEYYKEALVHARICLPATDPLIKTVINNWLEHLEGTGNFAAAA 1175 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rig | NP_611499.3 | WD40 | <80..>215 | CDD:295369 | 12/42 (29%) |
WD40 | 80..>215 | CDD:225201 | 12/42 (29%) | ||
WD40 repeat | 116..160 | CDD:293791 | |||
WD40 repeat | 167..204 | CDD:293791 | 8/31 (26%) | ||
WD40 | 434..821 | CDD:225201 | 101/471 (21%) | ||
WD40 | 446..719 | CDD:295369 | 71/337 (21%) | ||
WD40 | 613..874 | CDD:295369 | 74/316 (23%) | ||
WD40 repeat | 617..654 | CDD:293791 | 15/37 (41%) | ||
WD40 repeat | 659..691 | CDD:293791 | 11/66 (17%) | ||
WD40 repeat | 693..732 | CDD:293791 | 6/38 (16%) | ||
WD40 repeat | 744..785 | CDD:293791 | 17/60 (28%) | ||
WD40 repeat | 793..831 | CDD:293791 | 10/37 (27%) | ||
WD40 repeat | 838..861 | CDD:293791 | 4/22 (18%) | ||
gemin5 | XP_004912843.1 | WD40 | 48..395 | CDD:392136 | 81/459 (18%) |
WD40 repeat | 58..119 | CDD:293791 | 16/60 (27%) | ||
WD40 repeat | 125..184 | CDD:293791 | 21/169 (12%) | ||
WD40 repeat | 189..254 | CDD:293791 | 15/74 (20%) | ||
WD40 | 223..705 | CDD:225201 | 108/529 (20%) | ||
WD40 repeat | 275..316 | CDD:293791 | 6/40 (15%) | ||
WD40 repeat | 323..361 | CDD:293791 | 5/39 (13%) | ||
WD40 repeat | 369..409 | CDD:293791 | 6/40 (15%) | ||
WD40 repeat | 416..441 | CDD:293791 | 13/24 (54%) | ||
WD40 repeat | 460..495 | CDD:293791 | 7/34 (21%) | ||
WD40 repeat | 524..562 | CDD:293791 | 8/48 (17%) | ||
WD40 repeat | 568..623 | CDD:293791 | 14/55 (25%) | ||
WD40 repeat | 629..654 | CDD:293791 | 7/24 (29%) | ||
WD40 repeat | 673..705 | CDD:293791 | 7/37 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 85 | 1.000 | Inparanoid score | I5006 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D283127at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR46362 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.160 |