DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and wdr17

DIOPT Version :9

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_004911230.2 Gene:wdr17 / 100487772 XenbaseID:XB-GENE-1000178 Length:1339 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 <80..>215 CDD:295369
WD40 80..>215 CDD:225201
WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 434..821 CDD:225201
WD40 446..719 CDD:295369
WD40 613..874 CDD:295369
WD40 repeat 617..654 CDD:293791
WD40 repeat 659..691 CDD:293791
WD40 repeat 693..732 CDD:293791
WD40 repeat 744..785 CDD:293791
WD40 repeat 793..831 CDD:293791
WD40 repeat 838..861 CDD:293791
wdr17XP_004911230.2 WD40 <69..470 CDD:225201
WD40 repeat 111..148 CDD:293791
WD40 repeat 155..192 CDD:293791
WD40 repeat 198..243 CDD:293791
WD40 repeat 251..288 CDD:293791
WD40 repeat 296..364 CDD:293791
WD40 repeat 383..417 CDD:293791
WD40 417..707 CDD:238121
WD40 repeat 422..460 CDD:293791
WD40 repeat 466..503 CDD:293791
WD40 repeat 509..544 CDD:293791
WD40 repeat 551..589 CDD:293791
WD40 repeat 595..632 CDD:293791
PTZ00420 615..>829 CDD:240412
WD40 repeat 638..675 CDD:293791
WD40 repeat 681..706 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326439at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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