DRSC/TRiP Functional Genomics Resources

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Protein Alignment rig and tep1

DIOPT Version :9

Sequence 1:NP_611499.3 Gene:rig / 37335 FlyBaseID:FBgn0250850 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_012825586.2 Gene:tep1 / 100485265 XenbaseID:XB-GENE-495387 Length:2663 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rigNP_611499.3 WD40 <80..>215 CDD:295369
WD40 80..>215 CDD:225201
WD40 repeat 116..160 CDD:293791
WD40 repeat 167..204 CDD:293791
WD40 434..821 CDD:225201
WD40 446..719 CDD:295369
WD40 613..874 CDD:295369
WD40 repeat 617..654 CDD:293791
WD40 repeat 659..691 CDD:293791
WD40 repeat 693..732 CDD:293791
WD40 repeat 744..785 CDD:293791
WD40 repeat 793..831 CDD:293791
WD40 repeat 838..861 CDD:293791
tep1XP_012825586.2 TROVE 309..634 CDD:399034
DUF4062 1008..1116 CDD:404200
WD40 1803..2077 CDD:238121
WD40 repeat 1803..1838 CDD:293791
WD40 repeat 1843..1879 CDD:293791
WD40 repeat 1885..1917 CDD:293791
WD40 repeat 1922..1961 CDD:293791
WD40 1963..2293 CDD:238121
WD40 repeat 1967..2002 CDD:293791
WD40 repeat 2009..2044 CDD:293791
WD40 repeat 2054..2089 CDD:293791
WD40 repeat 2095..2132 CDD:293791
WD40 repeat 2137..2178 CDD:293791
WD40 2176..2442 CDD:238121
WD40 repeat 2185..2222 CDD:293791
WD40 repeat 2229..2264 CDD:293791
WD40 repeat 2270..2304 CDD:293791
WD40 repeat 2311..2341 CDD:293791
WD40 2349..>2632 CDD:421866
WD40 repeat 2359..2393 CDD:293791
WD40 repeat 2400..2424 CDD:293791
WD40 repeat 2464..2527 CDD:293791
WD40 repeat 2537..2574 CDD:293791
WD40 repeat 2589..2623 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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