DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FAM21 and RCSD1

DIOPT Version :10

Sequence 1:NP_611496.1 Gene:FAM21 / 37331 FlyBaseID:FBgn0034529 Length:1469 Species:Drosophila melanogaster
Sequence 2:NP_443094.3 Gene:RCSD1 / 92241 HGNCID:28310 Length:416 Species:Homo sapiens


Alignment Length:508 Identity:109/508 - (21%)
Similarity:161/508 - (31%) Gaps:168/508 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   968 PPEDNDHAGEEVQKEAEPQKDELASTTRIHTIFYDDFSETARAGAVQPAPK---RFP------FD 1023
            |.|.|    ..|...|.|...:||..          |.|.|.|....||.|   |.|      | 
Human     5 PAETN----ANVDNSASPSVAQLAGR----------FREQAAAAKETPASKPTRRKPPCSLPLF- 54

  Fly  1024 DEPPPADETDRSEVKETPELQKP------TSPVKKLKMPNININVHALLPGSG------------ 1070
              ||..|.....|.|..|....|      :||:.:....|:..:..|||||:.            
Human    55 --PPKVDLGQNGEEKSPPNASHPPKFKVKSSPLIEKLQANLTFDPAALLPGASPKSPGLKAMVSP 117

  Fly  1071 -----SVPKLIRKQESSSSERDEPQAT--VQTEAEAPSSGQNTVSSADGVLQHVNKSRARGPAKR 1128
                 |.|       ||...|..|...  |....:.|..|.:        |...||.|.||..||
Human   118 FHSPPSTP-------SSPGVRSRPSEAEEVPVSFDQPPEGSH--------LPCYNKVRTRGSIKR 167

  Fly  1129 RPSTRRGRKENYAKSLLDAGQNEGPTASTRDSPEVEHSERSSIKAPSPQYVKPEKLFSTPAQQIQ 1193
            ||.:||     :.:|..|.|:       ..|...||.|:::..|......|.|.| ...|...:.
Human   168 RPPSRR-----FRRSQSDCGE-------LGDFRAVESSQQNGAKEEDGDEVLPSK-SKAPGSPLS 219

  Fly  1194 PQ------------LQRPP----PSNTGGSFLDSPDEDDSFFNSVPTKTVEGKQG---------- 1232
            .:            .::||    ||.|     :..:||.:        |.|.|.|          
Human   220 SEGAAGEGVRTLGPAEKPPLRRSPSRT-----EKQEEDRA--------TEEAKNGEKARRSSEEV 271

  Fly  1233 -------TDPPKSYRSFLDSPDADDKLFSDLENNKAGINVVPVEK----KPPKMANSFLASPDED 1286
                   .:.|:|.::  ..|:|:::..|..|...|| ....:||    |..::.|..: .|:.|
Human   272 DGQHPAQEEVPESPQT--SGPEAENRCGSPREEKPAG-EEAEMEKATEVKGERVQNEEV-GPEHD 332

  Fly  1287 DFLFDSVKTNATTTAQKAFAAEIMNAFQKVTTAPPKPSNAKEAAKPKSQAAPKLFDDSDDDDDDL 1351
                          :|:....|...|.::...:|  |...|....||.:                
Human   333 --------------SQETKKLEEGAAVKETPHSP--PGGVKGGDVPKQE---------------- 365

  Fly  1352 FARAPSIQTASKPVQAKQPPKPAATSLFSSDDEEAEVPVKSAPAKKLPVKPSK 1404
              :....|.....::....|:.....|.:|.:.::| |....|....||:.:|
Human   366 --KGKEKQQEGAVLEPGCSPQTGPAQLETSSEVQSE-PAVPKPEDDTPVQDTK 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FAM21NP_611496.1 PHA03307 353..>583 CDD:223039
PHA03307 931..>1207 CDD:223039 71/288 (25%)
CAP-ZIP_m 1045..1163 CDD:464595 34/142 (24%)
RCSD1NP_443094.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..84 25/95 (26%)
CAP-ZIP_m 81..>166 CDD:464595 23/99 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..416 81/398 (20%)
RCSD 229..329 CDD:428350 23/116 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.