DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11180 and gpatch4

DIOPT Version :10

Sequence 1:NP_611495.1 Gene:CG11180 / 37330 FlyBaseID:FBgn0034528 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_988976.1 Gene:gpatch4 / 394573 XenbaseID:XB-GENE-922177 Length:323 Species:Xenopus tropicalis


Alignment Length:326 Identity:84/326 - (25%)
Similarity:129/326 - (39%) Gaps:72/326 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RFGTKMLEKMGWTKGSGLGANLNGEKDFVRIRFKNDAEGLGFEQRDDQWTVH--EDGFNGLLKSL 90
            ||..:.:.|.|||:|.|||...||..:.::::.|.|..|:|.... :|:|.|  :..||....|:
 Frog    13 RFAEQQMHKHGWTEGKGLGRRENGISEAIKVKVKCDHAGVGHNSA-EQFTFHWWDHVFNKTASSI 76

  Fly    91 NGE-DSGGI-------------DKEPESEEEARPMGFG----FKAIEP------EEPSKKKLKEN 131
            :.| |..|:             :|:|......|.|.:|    ...:.|      :|||..: ..:
 Frog    77 SVEADQDGVKVNRTKDDDAPVTNKKPRKALSNRNMLYGRFVKSATLLPGGEQAVKEPSSSE-SSD 140

  Fly   132 TSG-------------MSLEERSKQSRARVHYKKFTRGKDLAL------YSEKDLANIFGKKATE 177
            :||             |:.|:..|....|..:|....|..::.      ..|::....:|.|..:
 Frog   141 SSGDEDEKLDLSSATKMTDEDLRKVCGGRTAHKGARHGLTMSAKLSRLEEQEREFLAKYGNKQQK 205

  Fly   178 DVERYPEPVLAVQPE--------EPNPNFAGVQTIVTGLSTTDYFKQKMEAMKNRLKKGSQVEDN 234
            |      .|.||.||        ....|.:|      ....|:...:|.:..:.|:....:.|:.
 Frog   206 D------KVKAVTPEITEDLLGKNRQQNDSG------ECPETNNSHKKKKKKRERVDSEREEEEE 258

  Fly   235 NEAQTNGHAEKFEQISADNDEVTSKKKKKKKDKERADEPPTKEE---EPEQVASMPKKKKKSKRS 296
            .|:|.|.|.|  ||:....:|:.|.||||.|.|.|......:||   |.......||||||.|..
 Frog   259 EESQENRHEE--EQVPLSEEEIKSSKKKKSKKKHREQSASPQEEQVTESTDFCIKPKKKKKKKNK 321

  Fly   297 S 297
            |
 Frog   322 S 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11180NP_611495.1 G_patch 25..70 CDD:197727 16/41 (39%)
gpatch4NP_988976.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 9/18 (50%)
G-patch 19..55 CDD:396249 14/35 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..110 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 124..185 12/61 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..323 41/140 (29%)

Return to query results.
Submit another query.