DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11180 and Gpatch4

DIOPT Version :9

Sequence 1:NP_611495.1 Gene:CG11180 / 37330 FlyBaseID:FBgn0034528 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001020150.1 Gene:Gpatch4 / 295228 RGDID:1311086 Length:407 Species:Rattus norvegicus


Alignment Length:573 Identity:124/573 - (21%)
Similarity:194/573 - (33%) Gaps:221/573 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RFGTKMLEKMGWTKGSGLGANLNGEKDFVRIRFKNDAEGLGFE---QRDDQWTVHEDGFNGLLKS 89
            :|..:.|.|.|||:|.|||...||....:::..|.|..|:|.:   :..|.|  ..|.||....:
  Rat    13 KFAEEQLLKHGWTQGKGLGRKENGITQALKVTLKQDTHGVGHDPAKEFTDHW--WSDLFNKTAAN 75

  Fly    90 L---NGEDSGGIDKEPESEEEARPMGFGFKAIEPEEPSKKKLKENTSGMSLEERSKQSRARVHYK 151
            |   :|:|                                       |:.:...||::..|.|  
  Rat    76 LVVDSGKD---------------------------------------GVQIRRLSKETTQRSH-- 99

  Fly   152 KFTRGKDLALYSEKDLANIFGKKATEDVERYPEPVLAVQPEEPNPNFAGVQTIVTGLSTTDYFKQ 216
                .|...||.:      |.|.||                                        
  Rat   100 ----SKPSLLYQK------FVKTAT---------------------------------------- 114

  Fly   217 KMEAMKNRLKKGSQVEDNNEAQTNGHAEKFEQISADNDEVTSKKKKKKKDKERADEPPTKEEEPE 281
                                                   :||.::|..:|.|...:...:|..|.
  Rat   115 ---------------------------------------LTSGEEKPDRDLESCSDVDNREPIPP 140

  Fly   282 QVASMPKKKKKSKRSSLDEEKLVESEERTDEQPTAVEEIEQDAPKLKKKKKSKGSSLDEIEQSEN 346
            ::.:             ||..|...|.||..:          |.::....|:|   |..:|..|.
  Rat   141 KILT-------------DEMLLKACEGRTAHK----------AARIGITMKAK---LARLEAQEQ 179

  Fly   347 NFVEEKLVKSKERTSEQPTAVEEIEQDVPKLKKKKKSKRSSVDETEKTDNNC-VEMAEITEESER 410
            .|: .:|..||:..:.||....|     |..||||:.|:...:|...|:.:. .|:.|.|::|.|
  Rat   180 AFL-ARLKGSKDVGTSQPLTDSE-----PSQKKKKRRKQKEEEEAATTEKSLGEELLEHTDKSFR 238

  Fly   411 TSSKKKKSKK-----------EEESAEV----SIQTEESDQ----KKKRKSDKNKEIAE------ 450
            .|.||||.||           |||:|.|    .:.||:|||    ||||:...::|..|      
  Rat   239 KSKKKKKKKKDEREGTAIGSEEEEAAGVCGPAELSTEQSDQSSRKKKKRRRRHHEEEEEMGVCDE 303

  Fly   451 ---DSIEEPAAKKK-------KKSKKSDEVIVIDDDDLHRNNESHTSNENRTKNKSKSKDSQETT 505
               |....|.|...       :.|||....    ::||...:|....:..:.:.|.:.||.::..
  Rat   304 GGRDVTGGPKAVNSGADTDPWRSSKKRQTC----EEDLDTQDEEDKDDLTKKERKVRKKDKKKRQ 364

  Fly   506 QIQEEITIDLTAEAPSKKKKKSKEEKRKDNDEKDLEETPPASEATEKKSKKKS 558
            |..||: :|::          :|::.|....|...|.:.|..:|..||.|:|:
  Rat   365 QYCEEV-LDVS----------NKDDGRTWEAEDGGERSQPHPKARAKKKKRKT 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11180NP_611495.1 G-patch 27..70 CDD:279867 16/41 (39%)
Gpatch4NP_001020150.1 G-patch 8..55 CDD:279867 16/41 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..138 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..407 67/240 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2809
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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