DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9945 and Wdr38

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_083963.1 Gene:Wdr38 / 76646 MGIID:1923896 Length:303 Species:Mus musculus


Alignment Length:333 Identity:73/333 - (21%)
Similarity:116/333 - (34%) Gaps:112/333 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 FNRSGSKLLTACQDGFVRIYDGAKG-TYHLLNRIRARDVEWSIIDADFSPNGEHFAYSTWSRSLF 199
            |:..|..:.::..|..:|::|.|:. ..|:| :...|.||    ...|||:.:..|...|.:...
Mouse    76 FSPDGRLIASSSSDHSIRLWDVARSKCLHVL-KGHQRSVE----TVSFSPDSKQLASGGWDKRAI 135

  Fly   200 IMPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIGGSNNSTVIVTDIRTRNTQILRTHRM 264
            :..|..|.      .|:.|..|..:|.|..:|||.|.:..||.:|||.:.|:|. :|.::..|.:
Mouse   136 VWEVQSGR------RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA-STPVVSYHNL 193

  Fly   265 PGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTTFRSRDLSKSVASFIGHYDGITYIDSRNDG 329
            .|...|..|..:..          .|||                                     
Mouse   194 EGHTGNISCLCYSA----------SGLL------------------------------------- 211

  Fly   330 YHVLSNSKDQSIKIWDIRQPSNMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTY 394
               .|.|.|::|.:|                  .|||     |.:|                :..
Mouse   212 ---ASGSWDKTICVW------------------KPTT-----NNLP----------------LQL 234

  Fly   395 RGHRVTKTLLRAKFSP--MEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVIRDLDWHPD 457
            :||.:....|  .|||  ::.....|..|      :.::|.||||..|.::|...|.....:.||
Mouse   235 KGHTIWVNSL--AFSPDELKLASAGYSRT------VKVWDCLTGKCLETLKGMLDVAHACIFTPD 291

  Fly   458 RSEIVSGS 465
            ...:|||:
Mouse   292 GKLLVSGA 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 73/333 (22%)
WD40 repeat 131..170 CDD:293791 8/34 (24%)
WD40 <133..478 CDD:225201 73/333 (22%)
WD40 repeat 178..220 CDD:293791 9/41 (22%)
WD40 repeat 225..260 CDD:293791 14/34 (41%)
WD40 repeat 270..314 CDD:293791 5/43 (12%)
WD40 repeat 323..395 CDD:293791 10/71 (14%)
WD40 repeat 403..443 CDD:293791 12/41 (29%)
Wdr38NP_083963.1 WD40 <18..300 CDD:225201 73/333 (22%)
WD 1 24..63
WD40 25..300 CDD:238121 73/333 (22%)
WD40 repeat 31..66 CDD:293791
WD 2 66..105 6/28 (21%)
WD40 repeat 72..108 CDD:293791 8/32 (25%)
WD 3 108..147 11/48 (23%)
WD40 repeat 113..149 CDD:293791 10/45 (22%)
WD 4 150..189 15/39 (38%)
WD40 repeat 156..194 CDD:293791 14/38 (37%)
WD 5 195..233 16/126 (13%)
WD40 repeat 200..235 CDD:293791 14/123 (11%)
WD 6 236..277 14/48 (29%)
WD 7 279..303 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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