DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9945 and Wdr13

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_080413.2 Gene:Wdr13 / 73447 MGIID:1914661 Length:485 Species:Mus musculus


Alignment Length:499 Identity:91/499 - (18%)
Similarity:159/499 - (31%) Gaps:139/499 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 WNLVHALQQRENGLASPHSASFSKNQQRYISNLYIPNKKATRLMSLESKIFVTKFNRSGSKLLTA 146
            |..|.|:..|.|...:|....|.....|..|.|...|.||....:|..:....:....|.:....
Mouse     5 WQQVLAVDARYNAYRTPTFPQFRTQYIRRRSQLLRENAKAGHPPALRRQYLRLRGQLLGQRYGPL 69

  Fly   147 CQDGFVRIYDG--------------------------------AKGTYHL---LNRIRARD---- 172
            .:.|..|.|..                                ::|:|.|   :||....|    
Mouse    70 SEPGSARAYSNSIVRSSRTTLDRMEDFEDDPRALGARGHRRSVSRGSYQLQAQMNRAVYEDRPPG 134

  Fly   173 --VEWSIIDADFSPNG-----EHFA----YSTWSRSL--FIMPVNGGEDDCQWIDVNGLPSHRLA 224
              |..|:.:|..:..|     |::|    |..:.:.:  .:..|....||          .||||
Mouse   135 SVVPTSVAEASRAMAGDTSLSENYAFAGMYHVFDQHVDEAVPRVRFANDD----------RHRLA 189

  Fly   225 IFSLRYSPTGDKIIGGSNNSTVIVTDIRTRNTQILRTHRMPGKDV-----NSVCFLHDKDPNVII 284
            ..||..|.:..:::...  .||:         .:||.|.....|.     |.:......|..:.|
Mouse   190 CCSLDGSISLCQLVPAP--PTVL---------HVLRGHTRGVSDFAWSLSNDILVSTSLDATMRI 243

  Fly   285 AGCDDG--LLKVYD------LRTTFRSRDLSKSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSI 341
            ...:||  :.::.|      |..||:..:            :.:|.:.:.....||::.|..:.:
Mouse   244 WASEDGRCIREIPDPDGAELLCCTFQPVN------------NNLTVVGNAKHNVHVMNISTGKKV 296

  Fly   342 K-----------IWDIRQPSNMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTYR 395
            |           ......|..:......|..|....:|....::.:.           ..::.:.
Mouse   297 KGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFSFLFDMATGKLTKA-----------KRLVVHE 350

  Fly   396 GHRVTKTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVIRDLDWHPDRSE 460
            |..||....|:..| .|......:...| ..::::|.|:..  :.|::..|:...:...||.||.
Mouse   351 GSPVTSISARSWVS-REARDPSLLINAC-LNKLLLYRVVDN--EGALQLKRSFPIEQSSHPVRSI 411

  Fly   461 ------------IVSGSWDTHVHLNNFSRSNANRPVKR--SHSS 490
                        :|:||.|..||..:..|: |...|.:  .||:
Mouse   412 FCPLMSFRQGACVVTGSEDMCVHFFDVERA-AKAAVNKLQGHSA 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 69/426 (16%)
WD40 repeat 131..170 CDD:293791 9/73 (12%)
WD40 <133..478 CDD:225201 72/432 (17%)
WD40 repeat 178..220 CDD:293791 8/52 (15%)
WD40 repeat 225..260 CDD:293791 5/34 (15%)
WD40 repeat 270..314 CDD:293791 9/51 (18%)
WD40 repeat 323..395 CDD:293791 8/82 (10%)
WD40 repeat 403..443 CDD:293791 7/39 (18%)
Wdr13NP_080413.2 WD40 <165..485 CDD:225201 60/339 (18%)
WD 1 170..210 11/51 (22%)
WD 2 215..254 7/38 (18%)
WD40 repeat 221..257 CDD:293791 6/35 (17%)
WD40 repeat 263..300 CDD:293791 8/48 (17%)
WD 3 302..341 4/38 (11%)
WD40 repeat 308..347 CDD:293791 4/49 (8%)
WD40 repeat 354..400 CDD:293791 10/49 (20%)
WD 4 406..446 12/40 (30%)
WD40 repeat 408..450 CDD:293791 11/42 (26%)
WD 5 451..484 2/4 (50%)
WD40 repeat 456..480 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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