DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9945 and dcaf11

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001026845.1 Gene:dcaf11 / 567578 ZFINID:ZDB-GENE-050809-116 Length:541 Species:Danio rerio


Alignment Length:494 Identity:183/494 - (37%)
Similarity:270/494 - (54%) Gaps:49/494 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GNQLAIQMNSDEDDDFDSS-DNELGFNVINFTVNAMDLRSDYCSSEMPVIRGKPDLVKFQKTDMY 65
            |.|| :|..||.|:|.|.: |..||.            |.|      |.:..:||..:..:::::
Zfish    72 GLQL-VQSYSDSDEDSDGAWDGRLGH------------RYD------PPVDAQPDTQEVDRSEIH 117

  Fly    66 KEI---QASSGLVSNPNNRWNLVHALQQRENGLASPHSASFSKNQQRYISNLYIPNKKATRLMSL 127
            .:|   .|||||    ..|.:..|.|.:||.|..  ..:|||..:...|.:.::||....: .:.
Zfish   118 TQILLATASSGL----KGRHSFTHMLAEREQGRC--RGSSFSHGECSRIRSHFLPNHVVYK-DTY 175

  Fly   128 ESKIFVTKFNRSGSKLLTACQDGFVRIYDGAKGTYHLLNRIRARDVEWSIIDADFSPNGEHFAYS 192
            :.|:|...::..|:..|:||||..:|:||.::|.:.|...::||||.|||:|..|:|:.....||
Zfish   176 QQKVFCGVYSDEGNMFLSACQDQNIRLYDTSRGRFTLKKTVKARDVGWSILDVCFTPDARCVLYS 240

  Fly   193 TWSRSLFIMPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIGGSNNSTVIVTDIRTRNTQ 257
            :||..:.:..|:|..:....:|:|. ...|..:|||..|..|.:|:||:|:..:.|.| |.:|.:
Zfish   241 SWSDYIHVCSVDGDNETHTALDLNP-DERRFCVFSLAASTDGKEILGGANDGCLYVFD-REQNKR 303

  Fly   258 ILR--THRMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTTFRSRDLSKSVASFIGHYDGI 320
            .|:  .|.   .|||:|.|. |....::.:|.||.|.||:|.||.  ..|..:.|....||.|||
Zfish   304 TLKIDAHE---DDVNAVAFA-DSSSQLLFSGSDDALCKVWDRRTL--REDRPQPVGHLAGHRDGI 362

  Fly   321 TYIDSRNDGYHVLSNSKDQSIKIWDIRQPSNMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPL 385
            |:|.|:.|..:::||||||:||:||:|:.|.....:.||..|....|||||.:||:.....|| |
Zfish   363 TFIHSKGDARYLISNSKDQTIKLWDVRKFSPKEGLAASRLAVTQQNWDYRWQQVPQRALKRHK-L 426

  Fly   386 EGDSSIMTYRGHRVTKTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVIR 450
            .||:|:||||||.|..||:|.:|||...|||::|||||:||:|:|||||||.:...:..|...:|
Zfish   427 TGDTSVMTYRGHGVLHTLIRCRFSPEFSTGQKFIYTGCSTGKIVIYDVLTGSVVCKLSNHDACVR 491

  Fly   451 DLDWHPDRSEIVSGSWD--------THVHLNNFSRSNAN 481
            |:.|||..:.:||.|||        |..||.:..|...|
Zfish   492 DVSWHPYNNNMVSSSWDGAIRLWEHTQNHLLDKDRERMN 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 141/340 (41%)
WD40 repeat 131..170 CDD:293791 12/38 (32%)
WD40 <133..478 CDD:225201 144/354 (41%)
WD40 repeat 178..220 CDD:293791 11/41 (27%)
WD40 repeat 225..260 CDD:293791 13/34 (38%)
WD40 repeat 270..314 CDD:293791 15/43 (35%)
WD40 repeat 323..395 CDD:293791 33/71 (46%)
WD40 repeat 403..443 CDD:293791 23/39 (59%)
dcaf11NP_001026845.1 WD40 175..515 CDD:225201 143/348 (41%)
WD40 178..515 CDD:295369 143/345 (41%)
WD40 repeat 225..265 CDD:293791 11/39 (28%)
WD40 repeat 273..309 CDD:293791 14/36 (39%)
WD40 repeat 314..356 CDD:293791 16/44 (36%)
WD40 repeat 390..436 CDD:293791 19/46 (41%)
WD40 repeat 448..474 CDD:293791 16/25 (64%)
WD40 repeat 490..514 CDD:293791 10/23 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585913
Domainoid 1 1.000 111 1.000 Domainoid score I6237
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11886
Inparanoid 1 1.050 299 1.000 Inparanoid score I2691
OMA 1 1.010 - - QHG58362
OrthoDB 1 1.010 - - D1219799at2759
OrthoFinder 1 1.000 - - FOG0006573
OrthoInspector 1 1.000 - - oto41203
orthoMCL 1 0.900 - - OOG6_104227
Panther 1 1.100 - - LDO PTHR19847
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3057
SonicParanoid 1 1.000 - - X4812
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.