DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9945 and WDR38

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001263303.1 Gene:WDR38 / 401551 HGNCID:23745 Length:315 Species:Homo sapiens


Alignment Length:230 Identity:54/230 - (23%)
Similarity:94/230 - (40%) Gaps:58/230 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 NSTVIVTDIRTRNTQILRTHRMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTTFRSRDLS 307
            ||.|..| :..|..:....|   |.:|||..|  ..|..:::.|.:||.  ||...|  ||..|.
Human     2 NSGVPAT-LAVRRVKFFGQH---GGEVNSSAF--SPDGQMLLTGSEDGC--VYGWET--RSGQLL 56

  Fly   308 KSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSIKIWDIRQPSNMRNRSRSRQQVDPTTWDYRWN 372
            ..:.   ||...:.:.....||:...|.|.|.::::||:.:...:|                   
Human    57 WRLG---GHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLR------------------- 99

  Fly   373 RVPREFYNPHKPLEGDSSIMTYRGHRVTKTLLRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGK 437
                                ..:||:  :::....|||    ..|.:.:|....|::::||.:|:
Human   100 --------------------VLKGHQ--RSVETVSFSP----DSRQLASGGWDKRVMLWDVQSGQ 138

  Fly   438 IQEAIEGHRTVIRDLDWHPDRSEIVSGSWDTHVHL 472
            :...:.|||..|:..|:.|..:.:.:||||:.||:
Human   139 MLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 50/223 (22%)
WD40 repeat 131..170 CDD:293791
WD40 <133..478 CDD:225201 54/230 (23%)
WD40 repeat 178..220 CDD:293791
WD40 repeat 225..260 CDD:293791 5/16 (31%)
WD40 repeat 270..314 CDD:293791 13/43 (30%)
WD40 repeat 323..395 CDD:293791 8/71 (11%)
WD40 repeat 403..443 CDD:293791 9/39 (23%)
WDR38NP_001263303.1 WD40 <11..299 CDD:225201 50/220 (23%)
WD 1 19..58 16/47 (34%)
WD40 20..301 CDD:238121 49/211 (23%)
WD40 repeat 26..61 CDD:293791 12/43 (28%)
WD 2 61..100 10/77 (13%)
WD40 repeat 67..103 CDD:293791 8/74 (11%)
WD 3 103..142 11/44 (25%)
WD40 repeat 108..144 CDD:293791 9/39 (23%)
WD 4 145..184 12/29 (41%)
WD40 repeat 151..189 CDD:293791 8/23 (35%)
WD 5 190..228
WD40 repeat 195..230 CDD:293791
WD 6 231..272
WD40 repeat 236..272 CDD:293791
WD 7 275..313
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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