DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9945 and wdr13

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001018867.1 Gene:wdr13 / 334827 ZFINID:ZDB-GENE-050522-274 Length:482 Species:Danio rerio


Alignment Length:343 Identity:65/343 - (18%)
Similarity:123/343 - (35%) Gaps:104/343 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VTKF--NRSGSKLLTACQDGFVRIYDGAKGTYHLLNRIRARDVEWSIIDADFSPNGEHFAYSTWS 195
            ||.|  :.|...:::..:||.:||::...|     ..||      .::|    |.|......|: 
Zfish   217 VTDFAWSLSNDIIVSTSKDGTLRIWNTEDG-----RCIR------EVVD----PEGSELLCCTF- 265

  Fly   196 RSLFIMPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIGGSNNSTVIVTDIRTRNTQILR 260
                 .|||..      :.|.|.....|.:.::   .||.|:.|||:                  
Zfish   266 -----QPVNNN------LTVVGNSKQHLQVVNI---STGKKVKGGSS------------------ 298

  Fly   261 THRMPGKDVNSVCFLHDKDPNVIIAGCDDGLL--KVYDLRTTFRSRDLSKSVASFIGHYDGITYI 323
              ::.|: |.|:.|  |....::.||.|.|.:  .::|:.|    ..|:|:....:.....|:.|
Zfish   299 --KLTGR-VLSLSF--DAPGRILWAGDDRGSIFSFLFDMAT----GKLTKAKRLVVNEGSSISSI 354

  Fly   324 DSRNDGYHVLSNSKDQSIKIW---DIRQPSNMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPL 385
            .:|:                |   :.|.||.:.|...::..:                   ::.:
Zfish   355 SARS----------------WISREARDPSLLVNACVNKLLL-------------------YRVV 384

  Fly   386 EGDSSIMTYRGHRVT--KTLLRAKFSPMEQTGQ-RYIYTGCATGRIIIYDV--LTGKIQEAIEGH 445
            :.:.::...|...:.  ...|.:.|.|:....| ..:.||.....:..:||  .|..|...::||
Zfish   385 DNEGTLQLKRSFPIQHGSQPLHSIFCPLMSFRQGACVVTGSEDACVYFFDVERNTKAIVNKLQGH 449

  Fly   446 RTVIRDLDWHPDRSEIVS 463
            ...:.|:.::.|.|.:.|
Zfish   450 SGPVLDVSFNCDESLLAS 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 65/343 (19%)
WD40 repeat 131..170 CDD:293791 10/38 (26%)
WD40 <133..478 CDD:225201 65/343 (19%)
WD40 repeat 178..220 CDD:293791 9/41 (22%)
WD40 repeat 225..260 CDD:293791 6/34 (18%)
WD40 repeat 270..314 CDD:293791 11/45 (24%)
WD40 repeat 323..395 CDD:293791 7/74 (9%)
WD40 repeat 403..443 CDD:293791 10/42 (24%)
wdr13NP_001018867.1 WD40 <162..482 CDD:225201 65/343 (19%)
WD40 repeat 173..212 CDD:293791
WD40 209..478 CDD:295369 65/343 (19%)
WD40 repeat 217..253 CDD:293791 11/46 (24%)
WD40 repeat 261..297 CDD:293791 11/50 (22%)
WD40 repeat 304..400 CDD:293791 21/136 (15%)
WD40 repeat 350..397 CDD:293791 9/81 (11%)
WD40 repeat 408..447 CDD:293791 9/38 (24%)
WD40 repeat 453..477 CDD:293791 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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