DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9945 and WSB1

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_056441.6 Gene:WSB1 / 26118 HGNCID:19221 Length:421 Species:Homo sapiens


Alignment Length:366 Identity:73/366 - (19%)
Similarity:134/366 - (36%) Gaps:128/366 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 WSIIDADFSPNGEHFAYSTWSRSLFIMPVNGGEDDCQWIDVNGLPSHRLAIFSLRYSPTGDKIIG 239
            |::.   |:|:|.:||:|...|::.::|         |       |..|..|.|.    |.|.: 
Human    38 WTVA---FAPDGSYFAWSQGHRTVKLVP---------W-------SQCLQNFLLH----GTKNV- 78

  Fly   240 GSNNSTVIV----TDIRTRNTQILRTHRMPGKDV-------------NSVC-------FLHDKDP 280
             :|:|::.:    :|...:|..  |.|.:...|:             .|.|       |...:|.
Human    79 -TNSSSLRLPRQNSDGGQKNKP--REHIIDCGDIVWSLAFGSSVPEKQSRCVNIEWHRFRFGQDQ 140

  Fly   281 NVIIAGCDDGLLKVYDLRTTFRSRDLSKSVASFIGHYDGITYIDSRNDGYHVL-SNSKDQSIKIW 344
            .::..|.::|.:|::|:.|       .|.:.:.:.|.:.:..:....||..:| |.|:|:::::|
Human   141 LLLATGLNNGRIKIWDVYT-------GKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198

  Fly   345 DIRQPSNMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTYRGHRVTKTLLRAKFS 409
            |::...||....|..|     .|.|.....|            |||::                 
Human   199 DLKDDGNMMKVLRGHQ-----NWVYSCAFSP------------DSSML----------------- 229

  Fly   410 PMEQTGQRYIYTGCATG---RIIIYDVLTGKIQEAIEGHRTVIRDLDWHPDRSEIVSGSWDTHVH 471
                         |:.|   .:.::::....:...:|||...:...|:.||.:.:.:.|:||.|:
Human   230 -------------CSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRVY 281

  Fly   472 ---------LNNFSR----------SNANRPVKRSHSSDHD 493
                     |..|..          ..||....||.|..||
Human   282 IWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 61/319 (19%)
WD40 repeat 131..170 CDD:293791
WD40 <133..478 CDD:225201 66/349 (19%)
WD40 repeat 178..220 CDD:293791 9/41 (22%)
WD40 repeat 225..260 CDD:293791 8/38 (21%)
WD40 repeat 270..314 CDD:293791 10/50 (20%)
WD40 repeat 323..395 CDD:293791 18/72 (25%)
WD40 repeat 403..443 CDD:293791 2/42 (5%)
WSB1NP_056441.6 WD 1 32..71 12/51 (24%)
WD40 38..382 CDD:225201 73/366 (20%)
WD40 repeat 59..105 CDD:293791 14/69 (20%)
WD 2 124..165 10/47 (21%)
WD40 135..388 CDD:238121 47/242 (19%)
WD 3 168..208 11/39 (28%)
WD40 repeat 174..212 CDD:293791 10/37 (27%)
WD 4 212..251 9/85 (11%)
WD40 repeat 217..253 CDD:293791 7/77 (9%)
WD 5 254..293 10/38 (26%)
WD40 repeat 261..299 CDD:293791 9/37 (24%)
WD 6 309..346 7/14 (50%)
WD40 repeat 314..353 CDD:293791 5/9 (56%)
SOCS_WSB1_SWIP1 382..421 CDD:239715
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.