DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9945 and Dcaf10

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_694807.2 Gene:Dcaf10 / 242418 MGIID:2140179 Length:566 Species:Mus musculus


Alignment Length:307 Identity:67/307 - (21%)
Similarity:121/307 - (39%) Gaps:93/307 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 AIFSLRYSPTGDKIIGGSNNSTVIVTD-IRTRNTQIL-RTHRMPGKD-VNSVCFLHDKDPNVIIA 285
            |:|:|.|||.|..:......:.|::.| |.:::.:.| ..|    :| ||::.||    .|.:.|
Mouse   177 AVFNLEYSPDGSVLTVACEQTEVLLFDPISSKHIKTLSEAH----EDCVNNIRFL----DNRLFA 233

  Fly   286 GC-DDGLLKVYDLRTTFRSRDLSKSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSIKIWDIRQP 349
            .| ||..:.::||      |.|:..|.:..||...:..|:...:...::::..|.::.|||.   
Mouse   234 TCSDDTTIALWDL------RKLNTKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDT--- 289

  Fly   350 SNMRNRSRSRQQVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTYRGHRVTKTLLRAKFSP---- 410
                                  ||...:.. |||..          .|  |:.|:|.:.:|    
Mouse   290 ----------------------NRCTEDGC-PHKKF----------FH--TRFLMRMRLTPDCSK 319

  Fly   411 -MEQTGQRYIYTGCATGRIIIYDVLTGKIQEAIEGHRTVIRDLDWHPDRSEIVSGSWDTHVHLNN 474
             :..|...|:        :|::::...|..|.  |...::        |:...:.|.|    |..
Mouse   320 MLISTSSGYL--------LILHELDLTKSLEV--GSYPIL--------RARRTTSSSD----LTT 362

  Fly   475 FSRSNANR----PVKRSHSSDHDKKPLRRSRR--LANRN----VTPD 511
            .|.|:.:|    |...:.|:..:|...|.|:|  ::.||    :||:
Mouse   363 TSSSSGSRVSGSPCHHNDSNSTEKHMSRASQREGVSPRNSLEVLTPE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 52/251 (21%)
WD40 repeat 131..170 CDD:293791
WD40 <133..478 CDD:225201 55/262 (21%)
WD40 repeat 178..220 CDD:293791
WD40 repeat 225..260 CDD:293791 10/36 (28%)
WD40 repeat 270..314 CDD:293791 13/44 (30%)
WD40 repeat 323..395 CDD:293791 10/71 (14%)
WD40 repeat 403..443 CDD:293791 8/44 (18%)
Dcaf10NP_694807.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 87..123
WD40 <171..326 CDD:295369 45/200 (23%)
WD 1 173..212 10/34 (29%)
WD40 <178..>326 CDD:225201 44/199 (22%)
WD40 repeat 179..214 CDD:293791 9/34 (26%)
WD 2 216..254 15/51 (29%)
WD40 repeat 221..257 CDD:293791 14/45 (31%)
WD 3 258..297 9/63 (14%)
WD40 repeat 263..289 CDD:293791 4/25 (16%)
WD 4 303..342 9/48 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..413 16/60 (27%)
WD 5 415..455
WD 6 477..515
WD40 524..562 CDD:197651
WD 7 533..566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.