DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9945 and wdr90

DIOPT Version :9

Sequence 1:NP_611494.1 Gene:CG9945 / 37329 FlyBaseID:FBgn0034527 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_003201394.2 Gene:wdr90 / 100038787 ZFINID:ZDB-GENE-070424-67 Length:1843 Species:Danio rerio


Alignment Length:440 Identity:89/440 - (20%)
Similarity:164/440 - (37%) Gaps:110/440 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 NKKATRLMSLESKIFVTKFNRSGSKLLTACQDGFVRIYDGAKGTYHLLNRIRARDVEWSIIDADF 182
            :::..:..|..:.|.|...:......:|..:|||:|:                    |.:   ||
Zfish   652 HQREKQTFSTGAGIAVNSISVCAKFCVTGSEDGFMRL--------------------WPL---DF 693

  Fly   183 SPNGEHFAYSTWSRSLFIMPVNGGEDDCQWIDVNGLPSHRLAIFS------LRYSPTGDKIIGGS 241
            |             |:|:...:  |.....::|:...|..||..|      |..:..|.:.:..|
Zfish   694 S-------------SVFLEAEH--EGPVSLVNVSSDGSRVLAATSTGNLGYLDVASRGYRTLMRS 743

  Fly   242 NNSTVI---VTDIRTRNTQILRTHRMPGKDVNSV----CFLHDKDPN-----------VIIAGCD 288
            :.::|:   |..:|.|.|.:.|...:...|::::    .|:.|.|.|           :...|..
Zfish   744 HTASVLGFSVDGVRRRVTTVSRDATVRVWDMDTLQQLYDFVTDDDENPCSVAFHPSMPLFACGSS 808

  Fly   289 DGLLKVYDLRTT---FRSRDLSKSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSIKIWDI---- 346
            .|.::|:|::|:   .:.|....||...|...|| ..:.|...||.||.:|.::...:..:    
Zfish   809 SGAVRVFDIQTSSLIAQHRQHCGSVECVIYSPDG-QCLFSAGSGYLVLYSSSEREHHVVRVLGNV 872

  Fly   347 ------RQPSNMRNRSRSRQ--QVDPTTWDYRWNRVPREFYNPHKPLEGDSSIMTYRGHRVTKTL 403
                  |.|..:...|.||:  .:.||.:..    ...|..:.::.|..|.||:......: .:.
Zfish   873 VMCGVNRSPDILAVSSDSRRLALIGPTEYIV----TIMEARSLNELLRVDVSIVDVESSTL-DSA 932

  Fly   404 LRAKFSPMEQTGQRYIYTGCATGRIIIYDVLTGK-IQEAIEGHRTVIRDLDWHPDRSEIVSGS-- 465
            |.|.|||...:   ::....:..:|:..|..||: :::..|.|:.....|....|...:::..  
Zfish   933 LNACFSPASLS---HLLISTSANKILWIDTHTGQLLRQVSEVHKHQCESLAVSEDGHYLLTAGQN 994

  Fly   466 ----WDTHVHLNNFSRSNANRPVKRSHSSDHDKKPLRRSRRLANRNVTPD 511
                ||..:.|      :.|..|...||     :|:|:.|      .|||
Zfish   995 SLKVWDYDMKL------DVNSQVFIGHS-----EPIRQVR------FTPD 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9945NP_611494.1 WD40 128..467 CDD:295369 75/384 (20%)
WD40 repeat 131..170 CDD:293791 7/38 (18%)
WD40 <133..478 CDD:225201 77/390 (20%)
WD40 repeat 178..220 CDD:293791 7/41 (17%)
WD40 repeat 225..260 CDD:293791 9/43 (21%)
WD40 repeat 270..314 CDD:293791 12/61 (20%)
WD40 repeat 323..395 CDD:293791 18/83 (22%)
WD40 repeat 403..443 CDD:293791 9/40 (23%)
wdr90XP_003201394.2 DUF667 7..197 CDD:282825
WD40 302..790 CDD:225201 33/175 (19%)
WD40 <450..689 CDD:295369 8/56 (14%)
WD40 repeat 457..495 CDD:293791
WD40 repeat 502..536 CDD:293791
WD40 repeat 552..594 CDD:293791
WD40 670..1000 CDD:295369 73/376 (19%)
WD40 repeat 670..701 CDD:293791 11/66 (17%)
WD40 repeat 707..742 CDD:293791 7/34 (21%)
WD40 repeat 746..784 CDD:293791 7/37 (19%)
WD40 repeat 792..827 CDD:293791 5/34 (15%)
WD40 818..1330 CDD:225201 51/236 (22%)
WD40 repeat 833..869 CDD:293791 10/36 (28%)
WD40 repeat 933..969 CDD:293791 9/38 (24%)
WD40 965..1314 CDD:295369 17/80 (21%)
WD40 repeat 976..1013 CDD:293791 7/42 (17%)
WD40 repeat 1211..1245 CDD:293791
WD40 <1214..1574 CDD:225201
WD40 1241..1557 CDD:295369
WD40 repeat 1251..1292 CDD:293791
WD40 repeat 1297..1365 CDD:293791
WD40 repeat 1392..1426 CDD:293791
WD40 repeat 1480..1528 CDD:293791
WD40 1491..1790 CDD:295369
WD40 1519..>1841 CDD:225201
WD40 repeat 1533..1569 CDD:293791
WD40 repeat 1576..1619 CDD:293791
WD40 repeat 1625..1661 CDD:293791
WD40 repeat 1668..1717 CDD:293791
WD40 repeat 1777..1809 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0266
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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