DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hil and CYK3

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_010166.1 Gene:CYK3 / 851440 SGDID:S000002275 Length:885 Species:Saccharomyces cerevisiae


Alignment Length:649 Identity:123/649 - (18%)
Similarity:230/649 - (35%) Gaps:182/649 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FNNQHKQDDKEVYCSSHVPKSGPGHLDQTSVGIRQALNAPRTNKFVNEQ----IRGTRSEVDGGP 113
            ::::..:..|::  ||.:|.|....:|    .:.:|..| ::.:.|||:    .:.:|...:..|
Yeast   104 YSDERPRPKKKL--SSSMPNSPKKPVD----SLTKARKA-KSKEMVNEKNIYNTQSSRHHNNSAP 161

  Fly   114 -LGGSRQSTPNGYGSRE--------------ISSPSQNDSDYKYGRFDASALHIAHALKQTEIQK 163
             |..:..|.|......|              :.:..:.|.......:.|:.||:|.:.::..   
Yeast   162 NLPLASHSKPQVRNFEESMNNPLPPLPPLPDLDNMRKTDKRAPKKSYSANDLHMARSSREYN--- 223

  Fly   164 AYNKAREKPIDFYLAREEQAHLEMKHRKEEDDL---------YRKFASKRAEEDRKIQDEFQDEW 219
             |.|..:|..|.::.       |.::..|||.:         |...::..:|....:..:|....
Yeast   224 -YYKDNQKFYDGFIP-------EKRYSLEEDSISSGLFSNSQYLNDSACSSENSFALMSDFSATS 280

  Fly   220 ERELQRLTHKFEKELATSRRSRDEANILTMRHEQQKEDLEKNMTLRRSKKKESITRKMLEHERYE 284
            .....|  ||:.:..:.|.:....||..:.:....:|..:.|.:.|..|..: |.||        
Yeast   281 AGSFAR--HKYAQSFSDSLQRSQNANGCSTKINDSQEFGDSNASSRNGKMGD-ILRK-------- 334

  Fly   285 TAALVDRQSSEMLELISARRSEYMQSESIFLDDEFSEGAVPVEYP-----LNAPIPAPP------ 338
                          :|..:|:..:.|.|:      |....|..||     .|..:.|.|      
Yeast   335 --------------IIIPKRNTNIYSSSV------SSPKSPKAYPKLPDIQNLNLSATPDEARDW 379

  Fly   339 -----------AVSKF----------------------QIY----TDPIE------FEDVDRIAI 360
                       .::|:                      .||    |:.::      ..||:...:
Yeast   380 IAVKCHLNRARTLTKYDKHPRYMRALEENRDLILHPQDSIYNGLNTNEVKGNTKPGLVDVELAEL 444

  Fly   361 SVAQEDQKTFTDLVRQ------------LVGRCTTDIEKARTIFRWITVKNLNAMHFDDDLRGD- 412
            ::...|:.|:...:|.            ...|.:|.:||.|.|:.:.|  .:.|: .||:...| 
Yeast   445 NIEYIDKMTWKRCIRDGTMTLDSWAQTTFSARYSTVLEKLRGIYIFCT--EMFAL-TDDNGTSDF 506

  Fly   413 --TPMGLLRGI--KYGTESYHV--LFKRLCSYAGLHCVVIKGYSKSAGYQPGVKFQDSRFRNSWN 471
              .|..|.:.:  |:.| .|.:  |||:|.:..|:.|.::.|:.|:    |.....:.::.:.|.
Yeast   507 SAEPQNLEKILYRKHCT-PYELTWLFKKLANSLGITCEIVIGFLKT----PSAINWEFKYNHCWL 566

  Fly   472 AVYVAGAWRFVQCNWG-----ARHLVNAKEAPKQGRGKNDSLRYEYDDHYFLTDPREFIYEFYPL 531
            .:.|...|||:....|     ....||.::..|.            ::.|||..|.|.||...|.
Yeast   567 RILVNKEWRFIDVILGNVTNPIHEFVNNRKIKKA------------ENSYFLMAPLEMIYTHIPP 619

  Fly   532 QEEWQLLKRPITLREFENLPFVRSLFFRYGL---HFADEGYGAVVFTDDTGAATVRIAMPTDMQ 592
            :|..|.:...|.......||.|...||:..|   .|:.    |:.|.:|:......:.:|.|::
Yeast   620 REFEQHIVPSIDQLSALYLPLVFPSFFKNELKLYKFST----ALSFLEDSEIYECSLEIPNDVE 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 3/16 (19%)
BAR <147..>265 CDD:299863 23/126 (18%)
TGc 418..486 CDD:214673 17/71 (24%)
CYK3NP_010166.1 SH3 13..65 CDD:418401
CYK3 28..882 CDD:227604 123/649 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5279
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3261
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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