DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and csrp1b

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001074083.1 Gene:csrp1b / 791132 ZFINID:ZDB-GENE-070112-252 Length:192 Species:Danio rerio


Alignment Length:127 Identity:36/127 - (28%)
Similarity:47/127 - (37%) Gaps:40/127 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSS-----HV 70
            |..|.:|||..:.|  ..:...||..||.|:.|...|...|...:|     .|:||.|     :.
Zfish     9 CGCCKKTVYFAEEV--QCEGQSFHKSCFLCMVCRKNLDSTTVAVHQ-----DEIYCKSCYGKKYG 66

  Fly    71 PK-----SGPGHLDQ---TSVGIRQA-------LNAPRTNKFVNEQIRGTRSEVDGGPLGGS 117
            ||     .|.|.|..   .::|||.|       .|.|..:||..:             ||||
Zfish    67 PKGYGFGGGAGTLSMDGGEALGIRPAGETSHRPTNNPNPSKFAQK-------------LGGS 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 19/63 (30%)
BAR <147..>265 CDD:299863
TGc 418..486 CDD:214673
csrp1bNP_001074083.1 LIM 7..62 CDD:295319 19/59 (32%)
LIM2_CRP 118..171 CDD:188787
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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