DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and nrap

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_021335836.1 Gene:nrap / 724004 ZFINID:ZDB-GENE-060616-224 Length:1862 Species:Danio rerio


Alignment Length:690 Identity:135/690 - (19%)
Similarity:221/690 - (32%) Gaps:285/690 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPKS-- 73
            |.||...||..::|..:..  .:|..||.|..|...||...|.::|     |..||..|.||:  
Zfish     6 CARCGFVVYPAEKVNLIGQ--NWHKACFHCEVCKMVLTANNYVSHQ-----KRPYCQVHNPKNNT 63

  Fly    74 ---------------------------------GPGHLDQTSVGIRQALNAPRTNKFVNEQIRGT 105
                                             ...|.|..|..|.||..|.:    :..|.:|.
Zfish    64 FTSVYETPVNINAKKQSEAVSENKYKEEGERFMSTFHYDMRSKEIEQARKASQ----LASQQQGY 124

  Fly   106 RSEVDGGPLGGSRQSTPNG-YGSREISSPSQ-----NDSDYKYG------RFDASA-----LH-- 151
            ::|..|      :||..:| ..|:||...||     :|.:||.|      :|.:.|     ||  
Zfish   125 QTEFVG------QQSFYSGSVTSQEIVRVSQTQKTISDVEYKRGHETRMLQFTSVADSPEVLHAK 183

  Fly   152 ----IAHALKQTE---------------------IQKA--------YNKAREKPI---------- 173
                :|..:|.||                     .:||        |.|..|:.:          
Zfish   184 TGVSLASDVKYTEEYEQSKGKGSFPAMITPGYEMAKKANTLASNLEYKKGHEERVSKYTTVTDTP 248

  Fly   174 DFYLAR---------------EEQ-------AHL---------------EMKH-RKEEDDLYRK- 199
            |..||:               |:|       ||.               ::|: :|.|.::..| 
Zfish   249 DVLLAKTQGKIVSDHVYTEGYEQQRGKGSFPAHFTPGYQVAKKAGDMASKVKYQQKYEQEIKGKA 313

  Fly   200 --------FASKRAEEDRKIQDEFQDEWER---------------ELQRLTH------KFEKELA 235
                    ||..:...:...|..:.:|:|:               ::.:..|      |::|:..
Zfish   314 STEAGAAEFALAKENAEHFSQHAYTEEYEQQRGKGSFPAMITPGYQMAKKAHDIASDLKYKKDFN 378

  Fly   236 TSRRSRDEANILT---------------MRHEQQKEDLE---------------KNMT-----LR 265
            ..:.|.....:.|               |...:.|:|||               ||::     ..
Zfish   379 KMKGSSAYHTLTTEDNLALKSARKINKLMSEVEYKKDLETTKGHSINYCETPQFKNVSKIAKYTS 443

  Fly   266 RSKKKESITRKMLEHERYETAALVDRQSSEML---ELIS--ARRSEYMQSESIFLDDEFSEGAVP 325
            .:|.||:.|..|..|  ||... :|:::...:   :|.|  :.:|||.|.:::  ..|::     
Zfish   444 DNKYKENYTNHMKGH--YEGGG-IDKKTMHAMNVRKLASDISYKSEYEQEKNV--QGEYN----- 498

  Fly   326 VEYPLNAPIPAPPAVSKFQIYTDPIEFEDVDRIAISVAQEDQKTFTDLVRQLVGRCTTDIEKART 390
              ||.|. .|:..:..|.:...|....:.:|::..|       ..||         |.:|.:|| 
Zfish   499 --YPANI-TPSYQSQKKLEPLKDKNYRQHIDKLKFS-------QVTD---------TPEIVQAR- 543

  Fly   391 IFRWITVKNLNAMHFDD--------------DLRGDTP--------MGLLRGIKYGTESYHVLFK 433
                     :||....|              .|..|.|        ..|:..||| .|.:.....
Zfish   544 ---------INAHQLSDLNYKANYEKTKTQYTLSQDMPELKKAKANAELVSDIKY-KEDWEKNKS 598

  Fly   434 RLCSYAGLHCVVIKGYSKSAGYQPGVKFQDSRFRNSWNAV 473
            :.|. .||..:.:|....|......:|:::|..:|...|:
Zfish   599 KACE-IGLDTLTLKAAKASRDLASDIKYKESYTKNKDKAI 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 18/58 (31%)
BAR <147..>265 CDD:299863 40/270 (15%)
TGc 418..486 CDD:214673 13/56 (23%)
nrapXP_021335836.1 LIM_N_RAP 6..58 CDD:188830 18/58 (31%)
NEBU 170..200 CDD:128523 8/29 (28%)
Nebulin 355..379 CDD:307158 3/23 (13%)
Nebulin 535..560 CDD:307158 8/43 (19%)
NEBU 565..595 CDD:128523 8/30 (27%)
NEBU 672..702 CDD:128523
NEBU 703..733 CDD:128523
NEBU 771..798 CDD:128523
NEBU 1014..1044 CDD:128523
NEBU 1158..1188 CDD:128523
NEBU 1257..1287 CDD:128523
NEBU 1292..1321 CDD:128523
NEBU 1401..1430 CDD:128523
NEBU 1644..1674 CDD:128523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574544
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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