DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and mical2b

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_005174396.1 Gene:mical2b / 569564 ZFINID:ZDB-GENE-061207-15 Length:1679 Species:Danio rerio


Alignment Length:535 Identity:114/535 - (21%)
Similarity:191/535 - (35%) Gaps:140/535 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TCLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKE--VYCSSHVP- 71
            ||:.|.:.||.::|:.  .:..|||..||:|..||..|.|     ..|..|.::  .||..|.. 
Zfish  1012 TCVFCQKRVYIMERLS--AEGFFFHRECFRCHICGCSLRL-----GAHTFDSQQGTFYCKMHFSQ 1069

  Fly    72 -KSGPGHL--DQTSVGIRQA----LNAPRTNKFVNEQIRGTRSEVDGGPLGGSR----QSTPNGY 125
             |:...|.  :....|||.:    .|...|:        |||.:..||....|.    |:.|:  
Zfish  1070 RKTSTRHRRGEIQDGGIRSSSITISNHTSTD--------GTRGQPSGGEFDSSTQQDLQTLPD-- 1124

  Fly   126 GSREISSPSQ-NDSDYKYGRFDASALHIAHALKQTEIQKAYNKAREKPIDFYLAREEQAHLEMKH 189
             |:||.|.|: .||..|....|:     |.|...:.:||.....         |:.|..:..:..
Zfish  1125 -SKEIISVSEVKDSSKKADPADS-----APACPDSPLQKVKRST---------AKGEITNKNILW 1174

  Fly   190 RKEEDD-----LYRKFASKRAEEDRKI--QDEFQDEWERELQRLTHKFEKELATSRR---SRDEA 244
            :|:...     |.:||...:.|:..::  :::...::|...:.|:.|.....:|...   ::|  
Zfish  1175 KKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKD-- 1237

  Fly   245 NILTMRHEQQKEDLEKNMTLRRSKK----------------------KESITRKMLEHERYETAA 287
            |..|...|..|..|.:...|....|                      |:.:|..:.|.|:.....
Zfish  1238 NSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWD 1302

  Fly   288 LV--------DRQSSEMLELISARRSE----YMQSE---SIF--------LDDEFSEGAVPVEYP 329
            |.        ::|...:...||.:...    :.|.|   .:|        |...||:|:.||...
Zfish  1303 LTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLR 1367

  Fly   330 LNAPIPAPP-AVSKFQIYTDPIEFEDVDRIAISVAQEDQKTFTDLVRQLVGRCTTDIEKARTIFR 393
            .|.|:.|.| :...|.:   ...|:|.:|..            .||.:...|..|:.|.| ::..
Zfish  1368 RNRPMKARPLSEGSFNV---GAVFQDEERCG------------SLVDEGEARPRTESEIA-SLLE 1416

  Fly   394 WITVKNLNAMHFDDDLRGDTPMGLLRGIKYGTESYHVLFKRLCSYAGLHCVVIKGYSKSAGY-QP 457
            .:.:.:..:....||:....|                  ::|..::.|....::|..:|.|. |.
Zfish  1417 QVALGSKTSRGTKDDMASLPP------------------RKLNFFSSLRIKRVEGAEQSRGEGQK 1463

  Fly   458 GVKFQDSRFRNSWNA 472
            .:....|||||..:|
Zfish  1464 DILSILSRFRNKASA 1478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 19/60 (32%)
BAR <147..>265 CDD:299863 21/127 (17%)
TGc 418..486 CDD:214673 12/56 (21%)
mical2bXP_005174396.1 FAD_binding_3 86..>274 CDD:332373
CH 522..623 CDD:306753
LIM_Mical 1013..1067 CDD:188823 19/60 (32%)
Atrophin-1 1080..>1344 CDD:331285 55/290 (19%)
YesN <1308..1371 CDD:330857 13/62 (21%)
DUF3585 1530..1665 CDD:314926
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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