DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and neb

DIOPT Version :10

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_073768769.1 Gene:neb / 566928 ZFINID:ZDB-GENE-041111-216 Length:6327 Species:Danio rerio


Alignment Length:404 Identity:81/404 - (20%)
Similarity:133/404 - (32%) Gaps:158/404 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 SPSQNDSDYKY-GRFDASALHI---------AHALKQTEIQ------KAYNKAREKP-IDF---- 175
            |.|:..|||:| .:|:||..|.         .|..:.:|:|      :.|.|.|.|. :||    
Zfish  5613 STSKLASDYQYKKKFEASRGHYHMIPDTPEQLHHKEASELQSHVKYKEKYEKERGKAMLDFETPT 5677

  Fly   176 YLAREEQAHLE-MKHRKEEDDLYRKF----------ASKRAEEDRKIQDEFQDEWEREL------ 223
            |:..:|..||: .|..|::.::..|.          |........||..|  .|:.|:|      
Zfish  5678 YVTAKEAQHLQSQKEYKKDFEMTMKGKNLSGLEVTPAMMHVRHATKIVSE--KEYRRDLEEGVKG 5740

  Fly   224 --------------------------------QRLTHKFEKELATSR----RSRDEANILT---- 248
                                            |.:..|....|||..    |:|:...||:    
Zfish  5741 KGLTVLEETPELLRAKNATQILCEREYKKALEQEIKGKGMLALATDTPDFLRARNATEILSQAKY 5805

  Fly   249 -------------------MRHEQQ----------KEDLEKNMT-------------LRRSKKKE 271
                               :.|.||          ||:.||.|:             :|.::|..
Zfish  5806 KQNAEHDRATYTTVIDTPDILHAQQIRNIVSQKKYKEEAEKTMSHYVPVLDTPEMQRVRENQKNF 5870

  Fly   272 SITRKMLEHERYETAALVDRQSSEMLELISARRSEYMQSESIFLDDEFSEGAVPVEYPLNAPIPA 336
            |..:..::.::.:......:.:.|||.:    :.......||...:|..:|....|.|       
Zfish  5871 STLQYQIDLKKSKGKVSAVQNTPEMLRV----KENTKNFSSIQYKEELGQGTAISETP------- 5924

  Fly   337 PPAVSKFQIYTDPIEFEDVDR--IAISVAQEDQKTFTDLVRQLVGRCTTDIEKARTIFRWITVKN 399
                          |.|.|.|  .|||..:     :.|.:.|  |....|:.:.:.:..  |.||
Zfish  5925 --------------EMERVKRNQEAISTIK-----YKDSLSQ--GISIPDLPEVKRVRE--TQKN 5966

  Fly   400 LNAMHFDDDLRGDT 413
            ::.:|:.:||.|.|
Zfish  5967 ISLIHYKEDLGGGT 5980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827
PTZ00121 <144..327 CDD:173412 54/301 (18%)
CYK3 <342..550 CDD:444090 19/74 (26%)
nebXP_073768769.1 None
Blue background indicates that the domain is not in the aligned region.

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