DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and Rassf

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster


Alignment Length:650 Identity:131/650 - (20%)
Similarity:223/650 - (34%) Gaps:193/650 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CLRCSETVYQVDR---VGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPK 72
            |.:|.:.||..:|   :|     ..:|..|.:|..||.:|.     ..||.:.....||  |||.
  Fly     4 CHKCGKPVYFAERKQSIG-----YDWHPECLRCEECGKRLN-----PGQHAEHKSVPYC--HVPC 56

  Fly    73 SGPGHLDQTSVGIRQALNAPRTNKFVNEQIRGTRSEVDGGPLGGSRQSTPNGYGSREISSPSQND 137
            .|             ||..|        |:.|          .|:|..:...||.:....|:...
  Fly    57 YG-------------ALFGP--------QLFG----------HGTRVESHKSYGVKGAQKPTGAQ 90

  Fly   138 SDYKYGRFDASALHIAHALKQTEIQKAYNKAREKPIDFYLAREEQAHLEMKHRKEEDDLYRKFAS 202
            ::......|    |:...|      |.||:       ||    :...||::.|:..:.|..:.|.
  Fly    91 ANGPPLPRD----HLESKL------KVYNQ-------FY----DNKSLEIRSREVNNRLVLEGAL 134

  Fly   203 KRAEEDRKIQDEFQDEWERELQRLTHKFEKELATSRRSRDEANILTMRHEQQKEDLEKNMTLRRS 267
            :.....:.:....:|:.:|.|.|..:......|.:..|.|:.|       :..|.|....|....
  Fly   135 RVYWGVQGVIHLKEDDDQRILVRKRNSCRVSKAANESSSDKEN-------EASESLAPPTTTTAE 192

  Fly   268 KKKESITRKMLEHERYETAALVDRQSSEMLEL------ISAR---RSEYMQSESIFLDDE----- 318
            ..:.|....:.|...:::.:|     :|:.||      .||.   .|:...:.::..|||     
  Fly   193 VDQLSTDVSLSESMTFDSCSL-----NEISELPTTPEDASANTTANSKEQTNGNVCNDDEDTTTT 252

  Fly   319 FSEGAVPVEYPLNAPIPAPPAVSKFQIYTDP--------IEFEDVD------------------- 356
            .|.|.:     :.||..:...||.    |.|        ::::|:|                   
  Fly   253 DSSGTL-----VEAPTASTSCVSS----TLPSKLDRLEKLDWDDIDDLLQVERRHNDKDRIYETM 308

  Fly   357 --RIAISVAQED---QKTFTDLVRQLVGRCTTDIEKARTIFRWITVKNLNAMHFDDDLRGDTPMG 416
              ::..|.:..|   .||.|:        .||..|.:.|     ...:.|....||.:   |..|
  Fly   309 PVKLPSSQSSSDSSPSKTSTE--------TTTTTESSST-----QSASTNTSSTDDFM---TATG 357

  Fly   417 LLRGIKYGTESYHVLFKRLCSYAGLH-CVVIKGYSKSAGYQPGVKFQDSRFRNSWNAVYVAGAWR 480
            .|.. ...|::...:.....|..... |       ..|..:| :.|:|  |:.|.:..||.||..
  Fly   358 SLTA-NTNTQNTTTVSTTETSLDNFETC-------DDATLKP-IDFED--FKRSVHQDYVNGANS 411

  Fly   481 FVQCNWGARHLVNAKEAPKQGR--------GKNDSLRYEYDDHYFL--TDP---------REFIY 526
            |.:.|.|.   :...:.....|        |:|.::...::..:.|  .||         |..:.
  Fly   412 FTEPNEGT---LKRNQPIDPSRIHDSLKLYGENSAMSKSFNCEHALRSIDPTLINDTMNLRSSVG 473

  Fly   527 EFYPLQEEWQLLK---RPITLREFENLPFV--RSLFFRYGLHFADEGYGAVVF--TDDTGAATVR 584
            ..:..|.::.|.|   ..:|.|: :..|:.  |.||.: |::.:..|....|:  :||...||:|
  Fly   474 SPHSAQRQYALQKSGSATVTSRD-QKKPYQQGRQLFEK-GINRSKSGPSCFVYSDSDDDDEATLR 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 16/61 (26%)
BAR <147..>265 CDD:299863 23/117 (20%)
TGc 418..486 CDD:214673 15/68 (22%)
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785 19/64 (30%)
UBQ 660..744 CDD:294102
Nore1-SARAH 762..799 CDD:293125
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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