DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hil and mical3a

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_021323435.1 Gene:mical3a / 402881 ZFINID:ZDB-GENE-050126-2 Length:2522 Species:Danio rerio


Alignment Length:519 Identity:98/519 - (18%)
Similarity:178/519 - (34%) Gaps:147/519 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YRPNFYES-----TCLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDD 61
            :|..|.::     .|..|.:.||.::|:.  .:..|||..||||.:|||.|.|.:|   ....:|
Zfish  1072 FRKEFPQNIGGSDVCFFCRKRVYVMERLS--AEGKFFHRSCFKCDYCGTTLRLSSY---AFDVED 1131

  Fly    62 KEVYCSSH--------------VPKSGPGH-------------LDQTSVGIRQALNAPR------ 93
            .:.||..|              .|.:.|.:             :|.....|.....|.|      
Zfish  1132 GKFYCKPHYCYRLSGVAQRKRPAPAAAPANAKEPQVLAVSPNTVDAPGQAITTQTPAERRPSETE 1196

  Fly    94 ----TNKFVNEQIRGT--RSEVDGGPLGGSRQSTPNGYGSREISS-PSQNDSDYKYGRFDASALH 151
                |...|.::::||  |.|::...|...|:        .|:.. |.:..:::..    :|.|.
Zfish  1197 VNGVTEPSVAKRLKGTPERIELENYRLSMMRE--------EELEEVPEETLAEHNL----SSVLD 1249

  Fly   152 IAHALKQTEIQKAYNKA----REKPIDFYLA-----------REEQAHLEMKHRK----EEDDLY 197
                 |.|:|::..:.:    .|:..|...|           ...:.|.::|...    ::|.|:
Zfish  1250 -----KATDIEEGSSSSESDMEEEDEDAEAAGPSDLGGVPWKEAVELHAKLKGESDPGADDDGLH 1309

  Fly   198 ----RKFASKRAEEDRKIQDEFQDE----------WERELQ------RLTHKFEKELATSRRSRD 242
                .....:..|||.:.:||.::|          ||||||      .|.::.:..:..:|..:.
Zfish  1310 DGDGEMDEDEEEEEDEEDEDEEEEEESSEAGDYFPWERELQSGLWLENLANEEDVSVFKARNLQI 1374

  Fly   243 EANI-------LTMRHEQQKEDLEK------------NMTLRRSKKKESITRKMLEHERYETAAL 288
            :..|       :.|...|.:..||.            |..|.:.....:.:.|.:.||  ...|.
Zfish  1375 QQAIHPVDPLDIQMESHQAEGVLEMPSVSPLGSQPSLNTQLTQPTSSTAPSHKSVRHE--AVRAW 1437

  Fly   289 VDRQSSEMLELISARRSE----------YMQSESIFLDDEFSEGAVPVEYPLNAPIPAPPAVSKF 343
            :|..|.|..|......:|          .:..|.|..|.|....:..::..:..|:......|:.
Zfish  1438 LDSMSGEPCEEDDDPEAEAGSPDFEPGTEIDQEDIPSDAEAEARSRCIDEVVTLPVDNDKTESQG 1502

  Fly   344 QIYTDPIEFEDVDRIAISVAQEDQKTFTDLVRQLVGRCTTDIEKARTIFRWITVKNLNAMHFDD 407
            |::          ..|...:...::...|:|...:.:....||:...:...:.||:..|..|.:
Zfish  1503 QVF----------NTAEKTSANPRELIVDVVLSPIQKPALPIEEVHEVSPVVLVKSPGARFFPE 1556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 22/72 (31%)
BAR <147..>265 CDD:299863 32/175 (18%)
TGc 418..486 CDD:214673
mical3aXP_021323435.1 FAD_binding_3 91..>239 CDD:332373
CH 536..636 CDD:306753
LIM_Mical 1086..1140 CDD:188823 21/58 (36%)
Herpes_BLLF1 <1488..1803 CDD:330317 12/79 (15%)
DUF4045 <1840..>1896 CDD:330572
SMC_N <2220..>2506 CDD:330553
DUF3585 2318..2508 CDD:314926
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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