DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and Nebl

DIOPT Version :10

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_063132596.1 Gene:Nebl / 307189 RGDID:1308315 Length:1014 Species:Rattus norvegicus


Alignment Length:434 Identity:90/434 - (20%)
Similarity:172/434 - (39%) Gaps:106/434 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 TYFNNQHKQDDKEV-----YCSSHVPKSGPG--HLDQTSVGIRQALNAPRTNKFVNEQIRGTRSE 108
            ||.....:.|.|:.     ..|:...|.|.|  :.:.:.:|.....:|...:| ::.|:: .:.:
  Rat   172 TYTAEMDRPDIKKATQISKIISNAEYKKGQGIVNKEPSVIGRPDFEHAVEASK-LSSQVK-YKEK 234

  Fly   109 VDGGPLGGSRQSTPNGYGS-REISSPSQNDSDYKYGRFDASALH-----------IAHALKQTEI 161
            .|....|......|.|..| |:....:...||.||.: |...:|           :.||||.:.:
  Rat   235 FDNEMKGKGHHYNPLGSASFRQHQLATVLASDVKYKK-DVQTMHEPVSDLPNLLFLDHALKASRM 298

  Fly   162 QKAYNKAR---EKPIDFYLAREEQAHL----------EMKHRKEED--------DLYRKFASKRA 205
            ...:...:   |....::...|...||          ::|:|:|.:        |.....:.:.:
  Rat   299 LSGWEYKKNFEENKGSYHFDAEAPEHLHHRGNATLQSQVKYREEYEKNKGKTMLDFVETPSYQSS 363

  Fly   206 EEDRKIQDE--FQDEWERELQ-RLTHKFEKELATSRRSRDEANILTMRHEQQKEDLEKNMTLRRS 267
            :|.:|:|.|  :::::|:|:: |.:...:|..| ....:..:|:  ||.::.|:|||        
  Rat   364 KEAQKMQSEKVYKEDFEKEIKGRSSLDLDKTPA-FLHVKHISNL--MREKEYKKDLE-------- 417

  Fly   268 KKKESITRKMLEHERYETAALVDRQSSEMLELISARRSEYMQSESIFLDDEFSEGAVPVEYPLNA 332
               ..|..|.:|            .|||:|::..|:|:..|.||..:..|        :|..:..
  Rat   418 ---NEIKGKGME------------LSSEVLDIQRAKRASEMASEKEYKKD--------LELEIKG 459

  Fly   333 PIPAPPAVSKFQIYTDPIEFEDVDRIAISVAQEDQKTFTDLVRQLVGR------CTTDIEKARTI 391
                    ...||..|.:|.:.|.|.|...:::|.|  .||..::.|:      .|.|:::|:..
  Rat   460 --------KGMQIDADTLEIQRVKRAAKIASEKDYK--RDLETEIKGKGMQVSTDTLDVQRAKRA 514

  Fly   392 FRWITVKNLNAMHFDDDLRG-------DTPMGLLRGIKYGTESY 428
            ....:.|... ...:::::|       |.| .:||. |..:|.|
  Rat   515 SEMASQKQYR-KDLENEIKGKGMQVNVDIP-DMLRA-KRASEIY 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 5/23 (22%)
PTZ00121 <144..327 CDD:173412 43/217 (20%)
CYK3 <342..550 CDD:444090 24/100 (24%)
NeblXP_063132596.1 None

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