Protein Alignment Hil and Lima1

DIOPT Version :10

• Sequence 1: NP_611493.2
• Gene: Hil / 37328
• FlyBaseID: FBgn0050147
• Length: 818
• Species: Drosophila melanogaster
• Sequence 2: XP_006257416.1
• Gene: Lima1 / 300228
• RGDID: 1564050
• Length: 773
• Species: Rattus norvegicus
• Alignment Length: 390
• Identity: 81/390 - (20%)
• Similarity: 142/390 - (36%)
• Gaps: 95/390 - (24%)

  Fly    10 TCLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPK-- 72
            :|:.|.:|||.::|:  |.:...||..||:|.:|..||:|.||.:...:     :||..|..:
  Rat   405 SCVECQKTVYPMERL--LANQQVFHISCFRCSYCNNKLSLGTYASLHGR-----IYCKPHFNQLF 462

  Fly    73 SGPGHLDQTSVGIRQALNAPRTNKFVNEQIRGTRSEVDGGPLGGSRQSTPNGYGSREISSPSQND 137
            ...|:.|: ..|.:|..:. ..:|..||:..|                       |....||..:
  Rat   463 KSKGNYDE-GFGHKQHKDL-WASKGENEETLG-----------------------RPAQPPSAGE 502

  Fly   138 SDYKYGRFDASALHIAHALKQTEIQKAYNKARE--KPIDFYLAREEQAHLEMKHRKEE------- 193
            :.:..|..||....:.......|.:.:..:.||  ||     |..::..:......|:
  Rat   503 TPHSPGVEDAPIAKVGVLAASMEAKASSQREREENKP-----AETKKLRIAWPPPAEQGSSGSAP 562

  Fly   194 DDLYRKFASKRAEEDRKIQDEFQDEWERELQRLTHKFEKELATSRRSRDEANILTMRHEQQKEDL 258
            ::.::....|...||...:.|..::.:.:|::|    .:..:...|||......:.|....|...
  Rat   563 EEGFKVSKPKWPPEDEVCKTEAPEDVDLDLKKL----RRSSSLKERSRPFTVAASFRTSSVKSPK 623

  Fly   259 EKNMTLRR--------------------------SKKKESITRKMLEHERYETAALVDRQSSEML 297
            ..:.:||:                          |::|||:.:...:.|..|         :|..
  Rat   624 PLSPSLRKGWSEPEPEQSEEFGGGTVTQTESPRPSREKESVGKSRWQSEEAE---------AEAE 679

  Fly   298 ELISAR--RSEYMQSESIFLDDEFSEGAVPVEYPLNAPI-PAPPAVSKFQIYTDPIEF----EDV 355
            |....|  ||..::||| |:.:..|.....|.....:|: |..|....|...|...||    :||
  Rat   680 EAPRGRDGRSFELESES-FIGNGASIAEDDVAPAQRSPLEPESPGWPGFGDTTTAKEFNQKSQDV 743

  Fly   356  355
              Rat   744  743

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hil	NP_611493.2	LIM_Ltd-1	11..70	CDD:188827	20/58 (34%)
		PTZ00121	<144..327	CDD:173412	38/219 (17%)
		CYK3	<342..550	CDD:444090	6/18 (33%)
Lima1	XP_006257416.1	LIM_Eplin_alpha_beta	406..458	CDD:188869	20/58 (34%)