DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and Nrap

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_006526808.1 Gene:Nrap / 18175 MGIID:1098765 Length:1729 Species:Mus musculus


Alignment Length:619 Identity:121/619 - (19%)
Similarity:207/619 - (33%) Gaps:156/619 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPKSGP 75
            |.||...||..:::..: |.| :|..||.|..|...|::..:.::|     |:.||.:|.||:. 
Mouse     6 CSRCGYGVYPAEKISCI-DQT-WHKACFHCEVCKMMLSVNNFVSHQ-----KKPYCHAHNPKNN- 62

  Fly    76 GHLDQTSVGIRQALNAPRTNKFVNEQIRGTRSEVDGGPLGGSRQSTPNGYGSREISSPSQNDSDY 140
               ..||| ....||.  |.|.....:.|...:.||.|.................:|...|:.||
Mouse    63 ---TFTSV-YHTPLNL--TLKKSVAAMGGIDGKEDGEPFKSVLHWDMKSKAGAGAASRLMNERDY 121

  Fly   141 KYGRFDAS-----ALHIAHALKQTEI-----QKAYNKAREK------------PIDFYLAREEQA 183
            ..|..:.:     ||.....::..|.     ::.|.:.||:            |.........|.
Mouse   122 WPGYAEGNTWCPGALPDPEIVRMVEARQSLGEQGYTEDREQQQGKGSFPAMITPAYQRAKAANQL 186

  Fly   184 HLEMKHRKEEDDLYRKFAS-------KRAEEDRKIQDEFQDEWERELQRLTHKFEKELATSRRSR 241
            ..::::::..|:....|..       .||:...::|::.:...:...||....|...:..:.:..
Mouse   187 ASQVQYKRGHDERVSTFTPVADTPELLRAKAGGQLQNDVRYTEDGGQQRGKGSFPAMITPAYQIA 251

  Fly   242 DEANILT--MRHEQQKEDLEKNMT----LRRSKKKESITR--KMLEHE----------------R 282
            ..|..|.  :|:.||.....|.|.    ......|:|:.|  ::...|                .
Mouse   252 KRATELASDVRYHQQYHREMKGMASPVGAEGGMTKDSVDRCGQVYSEECDEPRGKGSFPAMITPA 316

  Fly   283 YETAALVDRQSSEMLELISARRSEYMQS-----ESIFLDDEF--------SEGAVPVEYPLNAPI 334
            |:.|    ::::|::..|..|:..:...     .|:...|..        |:....|||......
Mouse   317 YQNA----KKANELVSDIKYRQDFHKMKGAAHFHSLAAQDNLVLKRAQSVSKLVSEVEYKKGLEN 377

  Fly   335 PAPPAVSKFQIYTDPIEFEDVDRIAISVAQEDQKTFTDLVRQLVGRCTTDIEKARTIFRWITVKN 399
            ....:::    |.:..:|.:|.:  ||....|.|...:...||.|                    
Mouse   378 SKGHSIN----YCETPQFRNVSK--ISKFTSDNKYKENYQTQLRG-------------------- 416

  Fly   400 LNAMHFDD---DLRGDTPMGLLRGIKYGTESYHVLFKRLCSYAGLHCVVIKGYSKSAG--YQPG- 458
                |:|.   |.|      :|..:|.|:.:.:|.:|  ..|.  |.||...|..:|.  ||.. 
Mouse   417 ----HYDGVGMDRR------MLHALKVGSLASNVAYK--ADYK--HDVVDYNYLATATPFYQTTM 467

  Fly   459 --VKFQDSRFRNSWNAV---YVAGAWRFVQCNWGARHLVNAKEAPKQGRGKNDSLRYEYDDHYFL 518
              |..:|..:|.:.:.:   .|....:.||....|:.|.:........|.|   |.|        
Mouse   468 RLVPLKDVNYRQNIDRMKFSSVTNTPQIVQAKINAQQLSHVNYRADYERNK---LNY-------- 521

  Fly   519 TDPREFIYEFYPLQEEWQLLKRPITLREFENLPF 552
            |.|          |:..||||.......|..:.:
Mouse   522 TLP----------QDAPQLLKAKANAELFSEVKY 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 17/58 (29%)
BAR <147..>265 CDD:299863 23/152 (15%)
TGc 418..486 CDD:214673 19/75 (25%)
NrapXP_006526808.1 LIM_N_RAP 6..58 CDD:188830 17/58 (29%)
NEBU 203..231 CDD:128523 4/27 (15%)
Nebulin 315..341 CDD:366355 5/29 (17%)
NEBU 486..516 CDD:128523 5/29 (17%)
NEBU 521..551 CDD:128523 9/43 (21%)
Nebulin 564..590 CDD:366355
NEBU 626..656 CDD:128523
NEBU 725..755 CDD:128523
NEBU 760..790 CDD:128523
Nebulin 805..829 CDD:366355
NEBU 968..998 CDD:128523
NEBU 1003..1031 CDD:128523
Nebulin 1047..1072 CDD:366355
NEBU 1211..1241 CDD:128523
NEBU 1246..1276 CDD:128523
NEBU 1355..1380 CDD:128523
NEBU 1598..1624 CDD:128523
Nebulin 1638..1662 CDD:366355
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831518
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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