DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and Mical1

DIOPT Version :10

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_006512633.1 Gene:Mical1 / 171580 MGIID:2385847 Length:1207 Species:Mus musculus


Alignment Length:380 Identity:80/380 - (21%)
Similarity:130/380 - (34%) Gaps:112/380 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ESTCLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPK 72
            |..|..|.:.:|.::|.  ..|..|||..||.|..|...|....|  .|| ..|...||..|:|:
Mouse   839 EELCELCGKHLYILERF--CVDGHFFHRSCFCCHTCEATLWPGGY--GQH-PGDGHFYCLQHLPQ 898

  Fly    73 SGPGHLDQTSVGIRQALNAPRTNKF--------------VNEQIRGTRSEVDGGPLGGSRQSTPN 123
            ......|.......|.|..|..:..              |....:..|..:....|...|.|:.|
Mouse   899 EDQKEADNNGSLESQELPTPGDSNMQPDPSSPPVTRVSPVPSPSQPARRLIRLSSLERLRLSSLN 963

  Fly   124 ---GYGSREISSPSQNDSDYKYGRFDASALHIAHALKQTEIQKAYNKAREKPIDFYLAREEQAHL 185
               ..|:.....|.::.||.......:|.:.....::..::.:|..|..::        ||:   
Mouse   964 IIPDSGAEPPPKPPRSCSDLARESLKSSFVGWGVPVQAPQVPEAIEKGDDE--------EEE--- 1017

  Fly   186 EMKHRKEEDDL--------------------------YRKFASKRAEEDRKIQDEFQDEWER--- 221
            |.:..:||:.|                          :|:...:||:|         :|.:|   
Mouse  1018 EEEEEEEEEPLPPLEPELEQTLLTLAKNPGAMTKYPTWRRTLMRRAKE---------EEMKRFCK 1073

  Fly   222 --ELQRLTHKFEKELATSRRSRDEAN--ILTMRHE----QQKEDLEKNMTLRRSKKKESIT---- 274
              .:||..::.|   ||.|....|..  .|.:|.|    :|::.|..:..||..:||.|:.    
Mouse  1074 AQAIQRRLNEIE---ATMRELEAEGTKLELALRKESSSPEQQKKLWLDQLLRLIQKKNSLVTEEA 1135

  Fly   275 --------------RKMLEHE------RYETAAL-VDRQSS-----EMLELISAR 303
                          ::.|:||      |.||... .|.||.     ::||:::.|
Mouse  1136 ELMITVQELDLEEKQRQLDHELRGYMNREETMKTEADLQSENQVLRKLLEVVNQR 1190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 19/58 (33%)
PTZ00121 <144..327 CDD:173412 44/227 (19%)
CYK3 <342..550 CDD:444090
Mical1XP_006512633.1 UbiH 242..>379 CDD:440419
CH_MICAL1 665..770 CDD:409045
LIM_Mical_like 842..895 CDD:188744 19/57 (33%)
bMERB_dom 1080..1205 CDD:463467 27/114 (24%)
Blue background indicates that the domain is not in the aligned region.

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