DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hil and lima1b

DIOPT Version :10

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_021335365.2 Gene:lima1b / 108191643 ZFINID:ZDB-GENE-030131-4116 Length:1126 Species:Danio rerio


Alignment Length:438 Identity:88/438 - (20%)
Similarity:168/438 - (38%) Gaps:112/438 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CLRCSETVYQVDRVGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPK--S 73
            |:.|.:||||::|:  :.:...:|..||:|..|.|||:|.. |.:.|    ..:||..|..:  .
Zfish   635 CVSCQQTVYQLERL--VANQQIYHKKCFRCAVCSTKLSLAA-FASLH----GSIYCKPHFNQLFK 692

  Fly    74 GPGHLDQTSVGIRQ--ALNAPRTN----------------KFVNEQIRGTRSEVDGGPLGGSRQS 120
            ..|:.|: ..|.:|  .:.:|||:                :...|..||.:. .:..|:..||..
Zfish   693 SKGNYDE-GFGHKQHKEMWSPRTSQEEPEENSNSVSVKPVEKAEESHRGAKF-TEATPIIESRSQ 755

  Fly   121 T--------------------PNGYGSREISSP---SQNDSDY---KYGRFDASALHIAHALKQT 159
            |                    .:..|..::|||   |:..|.:   |:...|.|. ....:.::.
Zfish   756 TERPQSTSVETRKLRVAWPPPADSDGGAKVSSPAEVSKGPSRFFRAKWPPEDESP-SSQQSTERA 819

  Fly   160 EIQ--KAYNKAREKPIDFYLA---------REEQAHLEMKHRKEEDDLYRKFASKRAEEDRKIQD 213
            |::  :.....||:...|.||         ::.|:..:...|...:||       |:....|.:|
Zfish   820 ELKTLRRSTSLRERSRPFSLAPSLSSNPSKQDAQSAPKAVRRGSLEDL-------RSRSTAKTED 877

  Fly   214 EFQDEWERE--LQRLTHKFEKELATS----------RRSRDEANILTMRHEQQKEDLEKNMTLRR 266
            :..|...:|  .|....|.|| :.||          :::.:||.....|.|.:.:...|...::.
Zfish   878 KIPDAKTKEDDSQSKIEKKEK-MPTSILKHTNIEGEQQTENEAGRQVNRKEAEPQPTNKQSQIQL 941

  Fly   267 SKKKESITRKM---LEHERYETAALVDRQSSEMLELISARRSEYMQSESIFLDDEFSEGAVPVEY 328
            ::|:|.:..|.   |:....|:...::|..:|:.......:::..:.|:                
Zfish   942 NQKEEELVTKKEAELQTPNKESRLQLNRNEAELQLPNKEPQTQVTKKEA---------------- 990

  Fly   329 PLNAPIPAPPAVSKFQIYTDPIEFEDVDRIAISVAQEDQKTFTDLVRQ 376
                  ..|||..:.|:..:..|.|.|::..:.|...::::...|.|:
Zfish   991 ------ELPPANKQSQLQFNRREEELVNKKEVEVQTPNKESRIQLNRK 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 20/58 (34%)
PTZ00121 <144..327 CDD:173412 36/208 (17%)
CYK3 <342..550 CDD:444090 7/35 (20%)
lima1bXP_021335365.2 None

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