DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hil and LOC101730654

DIOPT Version :9

Sequence 1:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster
Sequence 2:XP_012826884.2 Gene:LOC101730654 / 101730654 -ID:- Length:950 Species:Xenopus tropicalis


Alignment Length:581 Identity:123/581 - (21%)
Similarity:209/581 - (35%) Gaps:189/581 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 VDRIAISVAQEDQKTFTDLVRQLVGRCTTDIEKARTIFRWITVKNLNAMHFDDDLRGDTPMGLL- 418
            :|..|:.|  ...:|...||:.|:...:||:||.|.|:.||      ..|.:.|:......||: 
 Frog   105 LDAYALKV--NGHRTLELLVKDLLCEASTDLEKTRAIWIWI------CHHIEYDVAETKSKGLVP 161

  Fly   419 -------RGIKYGTESYHVLFKRLCSYAGLHCVVIKGYSKSAGYQPGVKFQDSRFRNSWNAVYVA 476
                   :..|.....|.:||:|:||.|.:.|..:.||.|...:..|..       ::||.||:.
 Frog   162 PDPDATFQSRKTVCAGYPLLFQRMCSLADIQCETVCGYRKGQTFSEGPD-------HAWNVVYLE 219

  Fly   477 GAWRFVQCNWGARHLVNAKEAPKQGRGKNDSLR---YEYDDHYFLTDPREFIYEFYPLQEEWQLL 538
            .||..:....||.::             :||:.   ::|::.||||.|..||.:.:|.|..:|||
 Frog   220 SAWHLLDSTMGAGYI-------------DDSINKFTFQYNEFYFLTHPALFIEDHFPEQMHYQLL 271

  Fly   539 KRPITLREFENLPFVRSLFFRYGLHFADEGYGAVVFTDDTGAATVRIAM---------PTDMQ-- 592
            :.|::.::||.....||.|:..||..:.....|:.......:.|:..:.         .|:|.  
 Frog   272 ESPLSQKQFEENVQHRSHFYTLGLGSSHPHTSAIETVKGKASVTIERSQHIKFIITLNETEMPGL 336

  Fly   593 -------------------------------------------SCLIFHYNLKF----------- 603
                                                       .|...:.:||.           
 Frog   337 ITLTKHGTIFDVYPQKPGQHLLQIFAKRPGSDKAYHLVLDHIIDCRTVNNSLKIPKSLSNPVGPS 401

  Fly   604 ----------------------------YDSDEELSYDGVSLKRFVMQSVIGNI--------VAF 632
                                        :|.|..:.... :||...:::::.::        |.|
 Frog   402 WISEKAGLIQPSHVDPVIHTEDGHCTIGFDLDRPMKLTS-NLKSDEVKNILNHVIQKRQKHKVEF 465

  Fly   633 RVHAPCSGAFLLDIFANAVTPQEYLTGEPMKFKSVCKFKICCEELQTVMVPLPDCASGEWGPTKA 697
            :||.|.:|:::|.||:.:             |..:|.:.|.|...:....|.|.......||...
 Frog   466 QVHLPQAGSYVLQIFSGS-------------FGYICNYLITCSNTKVKCNPFPAALLNPVGPNPD 517

  Fly   698 TRLFGLIPITHQDPLIFAGRSLD----LQFRMSRPLTDFMATLHKNGIEEKKLAK-YVTHSTLDD 757
            |...|:.|.:|.||:|   .|.|    :.|.:.:.| ...:.|..|.:  |.|.: ::...:..:
 Frog   518 TEKLGIHPSSHPDPVI---NSKDGCCNISFALDKVL-HITSYLKYNDV--KPLVRNHIIQKSQKN 576

  Fly   758 IVTFIINFPEEGQYGLDIYTRELGGPQHHHHHNNNNSSSSSGEKHLLTHCCKYLINSSKRN 818
            .|||.:..|:.|.|.|.|:    ||              |:|      :.|.||:..|..|
 Frog   577 NVTFDVRLPQAGSYVLQIF----GG--------------STG------YICNYLLICSNPN 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827
BAR <147..>265 CDD:299863
TGc 418..486 CDD:214673 19/75 (25%)
LOC101730654XP_012826884.2 CYK3 <129..>305 CDD:227604 56/201 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D398889at33208
OrthoFinder 1 1.000 - - FOG0003908
OrthoInspector 1 1.000 - - otm47661
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3209
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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