DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mgat1 and CGL1

DIOPT Version :9

Sequence 1:NP_525117.2 Gene:Mgat1 / 37323 FlyBaseID:FBgn0034521 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_195537.2 Gene:CGL1 / 829981 AraportID:AT4G38240 Length:444 Species:Arabidopsis thaliana


Alignment Length:449 Identity:155/449 - (34%)
Similarity:233/449 - (51%) Gaps:47/449 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LVTWTYATYYLLLR--QTGIHTSRHQSLQAYKLNSQARDANMQSHHLAKNVFEFVKLKYLEKQPP 75
            |:...:...|:.:|  ||       ||..|.:|:|.....|..:..: :.:.:.|.:|       
plant    12 LIPAAFMFIYIQMRLFQT-------QSQYADRLSSAIESENHCTSQM-RGLIDEVSIK------- 61

  Fly    76 SVASTPQISIIAAEISAELPEQHVA----------KSATARIPTKTYLANGE-PVFPVVVFACNR 129
                  |..|:|.|......::.:.          |...|::     ...|: ||..|||.||:|
plant    62 ------QSRIVALEDMKNRQDEELVQLKDLIQTFEKKGIAKL-----TQGGQMPVAAVVVMACSR 115

  Fly   130 VS-VKKCIDNLVQYR-PSVEQFPIIVSQDCGDEPTKEAILSYGKQVTLIEQPDLSDITVLPKEKK 192
            .. :::.:.:::.|: |...::|:.:|||..|:..|...||| .|:|.::..|...: |..:..:
plant   116 ADYLERTVKSVLTYQTPVASKYPLFISQDGSDQAVKSKSLSY-NQLTYMQHLDFEPV-VTERPGE 178

  Fly   193 FKGYYKIARHYGWALNTTF-AVGFEFVIIVEDDLNVAPDFFEYFLGTHKLLKQDPSLWCVSAWND 256
            ...||||||||.|||:..| ...|..|||:|||:.:|||||:||.....|:.:|.::...|:|||
plant   179 LTAYYKIARHYKWALDQLFYKHKFSRVIILEDDMEIAPDFFDYFEAAASLMDRDKTIMAASSWND 243

  Fly   257 NGKAAVVDAAQPELLYRTDFFPGLGWMLTKDLWAELSVKWPKSFWDDWIRHPAQRKDRVCIRPEI 321
            ||:...|.  .|..|||:||||||||||.:..|.|||.||||::||||:|.....|.|..||||:
plant   244 NGQKQFVH--DPYALYRSDFFPGLGWMLKRSTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEV 306

  Fly   322 SRTRTFGKIGVSNGLFFDKYLKHIKLSEDFVQFTKINMSYLLKDNYDNTFLRRVYTYPIVTYDEL 386
            .||..||:.|.|.|.||.:||:.|||::..|.:...::.||.:.||...|...|.....:...:|
plant   307 CRTYNFGEHGSSLGQFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNYTKYFSGLVRQARPIQGSDL 371

  Fly   387 RRNLIRIEGPVRIQYTTREQYKRTTKMLGLMDDFKSGVPRTAYHGIVSF-YYNKRRVHL 444
            ......|:..|||:|..:.:::|.....|:.:::|.|||||||.|:|.| ....|||.|
plant   372 VLKAQNIKDDVRIRYKDQVEFERIAGEFGIFEEWKDGVPRTAYKGVVVFRIQTTRRVFL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mgat1NP_525117.2 GT13_GLCNAC-TI 119..449 CDD:133007 134/330 (41%)
CGL1NP_195537.2 GNT-I 13..443 CDD:281116 154/448 (34%)
Glyco_tranf_2_3 107..310 CDD:290369 90/206 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 244 1.000 Domainoid score I556
eggNOG 1 0.900 - - E1_KOG1413
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1804
Inparanoid 1 1.050 244 1.000 Inparanoid score I1060
OMA 1 1.010 - - QHG55205
OrthoDB 1 1.010 - - D1324622at2759
OrthoFinder 1 1.000 - - FOG0004830
OrthoInspector 1 1.000 - - oto3875
orthoMCL 1 0.900 - - OOG6_104509
Panther 1 1.100 - - LDO PTHR10468
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3409
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.