DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mgat1 and mgat1

DIOPT Version :9

Sequence 1:NP_525117.2 Gene:Mgat1 / 37323 FlyBaseID:FBgn0034521 Length:458 Species:Drosophila melanogaster
Sequence 2:NP_001011350.1 Gene:mgat1 / 496815 XenbaseID:XB-GENE-941671 Length:447 Species:Xenopus tropicalis


Alignment Length:465 Identity:217/465 - (46%)
Similarity:301/465 - (64%) Gaps:30/465 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RKVLLV---IGFLVTW-TYATYYLLLRQTGIHTSRHQSLQAYKLN-SQARDANMQSHH-LAKNVF 62
            |||.:.   ....::| .....||:.|..|   :.|..|.|:.:. ::|.:|.::... |.:.:.
 Frog     3 RKVSVAAWGAALFISWNAILLLYLMSRSRG---TDHSDLTAHVIQLAEAAEAELEKQKGLLQQIH 64

  Fly    63 EFVKLKYLEKQPPSVASTPQISIIAAEISAELPEQHVAKSATARIPTKTYLANGEP---VFPVVV 124
            .:..|...::.|..|...|.|.|..:.:|        :.|:..|         .:|   |.|::|
 Frog    65 YYSGLLNNQQSPSHVRPAPVIPIKKSNMS--------STSSPVR---------SDPLSLVIPILV 112

  Fly   125 FACNRVSVKKCIDNLVQYRPSVEQFPIIVSQDCGDEPTKEAILSYGKQVTLIEQPDLSDITVLPK 189
            .||:|.||::|:|:|::||||.|:||||||||||.|.|.:.|.|||..||.|:|||||::.|.|:
 Frog   113 VACDRPSVRRCLDSLLKYRPSAEKFPIIVSQDCGHEETGKVIDSYGDAVTHIKQPDLSEVAVPPE 177

  Fly   190 EKKFKGYYKIARHYGWALNTTF-AVGFEFVIIVEDDLNVAPDFFEYFLGTHKLLKQDPSLWCVSA 253
            .:||:|||||:|||.||||..| .:|::..|:|||||.|||||:|||..|..||::|..||||||
 Frog   178 HRKFQGYYKISRHYRWALNQIFKTMGYKAAIVVEDDLEVAPDFYEYFQATLTLLQKDHMLWCVSA 242

  Fly   254 WNDNGKAAVVDAAQPELLYRTDFFPGLGWMLTKDLWAELSVKWPKSFWDDWIRHPAQRKDRVCIR 318
            ||||||.|::|.....||||:||||||||:|.::||.||..|||.:|||||:|.|.||.:|.|:|
 Frog   243 WNDNGKEALIDPGGNSLLYRSDFFPGLGWLLLRELWEELEPKWPSAFWDDWVRRPEQRLERACVR 307

  Fly   319 PEISRTRTFGKIGVSNGLFFDKYLKHIKLSEDFVQFTKINMSYLLKDNYDNTFLRRVYTYPIVTY 383
            ||:|||||||:.|||.|.|||::|:.|||::|.|.|:|:::|||||||||..||.:||..|....
 Frog   308 PELSRTRTFGRKGVSQGQFFDQHLRFIKLNQDPVAFSKMDLSYLLKDNYDPMFLEQVYGAPKARA 372

  Fly   384 DELRRNLIRIEGPVRIQYTTREQYKRTTKMLGLMDDFKSGVPRTAYHGIVSFYYNKRRVHLAPNA 448
            :|:....:.....||::|||::.:|...:..|:|:|.||||.|.||.|:|||.:..|||.|||..
 Frog   373 EEVLHGQVPGGRTVRVEYTTKDTFKAMARAFGVMEDLKSGVARAAYKGVVSFTHRGRRVFLAPPK 437

  Fly   449 NWKGYELSWS 458
            :|.||:.|||
 Frog   438 DWTGYDPSWS 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mgat1NP_525117.2 GT13_GLCNAC-TI 119..449 CDD:133007 187/330 (57%)
mgat1NP_001011350.1 GT13_GLCNAC-TI 107..438 CDD:133007 187/330 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 417 1.000 Domainoid score I646
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1804
Inparanoid 1 1.050 421 1.000 Inparanoid score I1751
OMA 1 1.010 - - QHG55205
OrthoDB 1 1.010 - - D1324622at2759
OrthoFinder 1 1.000 - - FOG0004830
OrthoInspector 1 1.000 - - oto103990
Panther 1 1.100 - - LDO PTHR10468
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3280
SonicParanoid 1 1.000 - - X3409
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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