Protein Alignment lms and YHP1

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_010739.3
• Gene: YHP1 / 852062
• SGDID: S000002859
• Length: 353
• Species: Saccharomyces cerevisiae
• Alignment Length: 110
• Identity: 30/110 - (27%)
• Similarity: 52/110 - (47%)
• Gaps: 29/110 - (26%)

  Fly    85 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK----- 144
            |:||.||  |:.::..|:|.|:.....:.|||..|::|..::|..::|||||:|...|:.
Yeast   174 RRKRRRT--SSYELGILQTAFDECPTPNKAKRIELSEQCNMSEKSVQIWFQNKRQAAKKHKNSGN 236

  Fly   145 ------YTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPT 183
                  :::|..::.|:..|.|.|                :.|||
Yeast   237 TSHCKVHSNDSMSMISYSDAALEI----------------TSTPT 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	8/20 (40%)
		Homeodomain	87..143	CDD:459649	20/55 (36%)
YHP1	NP_010739.3	COG5576	123..278	CDD:227863	30/110 (27%)