Protein Alignment lms and HB-3

DIOPT Version :9

• Sequence 1: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_568309.2
• Gene: HB-3 / 831367
• AraportID: AT5G15150
• Length: 314
• Species: Arabidopsis thaliana
• Alignment Length: 202
• Identity: 57/202 - (28%)
• Similarity: 82/202 - (40%)
• Gaps: 66/202 - (32%)

  Fly     2 NSQSAVR---RYP-HSFSIEQILAKPEMRSSTSFEDSVQDES--------------GRGGNCL-- 46
            |:|..:|   .:| |.|..:|:           .||:.....              |.|||.:
plant    13 NNQEGLRLEMAFPQHGFMFQQL-----------HEDNAHHLPSPTSLPSCPPHLFYGGGGNYMMN 66

  Fly    47 ------GAS-----RASSPATSSCLDDNMDDGKSDIDLASDDGNG--LGDDRKKRPRTAFSAAQI 98
                  |.|     ...||.|::.::|  .|...:.|..||||:.  ||:.:|:     .:..|:
plant    67 RSMSFTGVSDHHHLTQKSPTTTNNMND--QDQVGEEDNLSDDGSHMMLGEKKKR-----LNLEQV 124

  Fly    99 KALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK---------------YTSD 148
            :|||..||.|..|...::..|||.|.|...||.|||||||.:||.|               ..||
plant   125 RALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSD 189

  Fly   149 VETLASH 155
            .::|.:|
plant   190 NDSLLAH 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	24/101 (24%)
		Homeobox	89..142	CDD:278475	22/52 (42%)
HB-3	NP_568309.2	HOX	115..168	CDD:197696	23/57 (40%)
		HALZ	170..208	CDD:280364	5/27 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910