Protein Alignment lms and HB-3

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_568309.2
• Gene: HB-3 / 831367
• AraportID: AT5G15150
• Length: 314
• Species: Arabidopsis thaliana
• Alignment Length: 202
• Identity: 57/202 - (28%)
• Similarity: 82/202 - (40%)
• Gaps: 66/202 - (32%)

  Fly     2 NSQSAVR---RYP-HSFSIEQILAKPEMRSSTSFEDSVQDES--------------GRGGNCL-- 46
            |:|..:|   .:| |.|..:|:           .||:.....              |.|||.:
plant    13 NNQEGLRLEMAFPQHGFMFQQL-----------HEDNAHHLPSPTSLPSCPPHLFYGGGGNYMMN 66

  Fly    47 ------GAS-----RASSPATSSCLDDNMDDGKSDIDLASDDGNG--LGDDRKKRPRTAFSAAQI 98
                  |.|     ...||.|::.::|  .|...:.|..||||:.  ||:.:|:     .:..|:
plant    67 RSMSFTGVSDHHHLTQKSPTTTNNMND--QDQVGEEDNLSDDGSHMMLGEKKKR-----LNLEQV 124

  Fly    99 KALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRK---------------YTSD 148
            :|||..||.|..|...::..|||.|.|...||.|||||||.:||.|               ..||
plant   125 RALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSD 189

  Fly   149 VETLASH 155
            .::|.:|
plant   190 NDSLLAH 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	24/101 (24%)
		Homeodomain	87..143	CDD:459649	23/55 (42%)
HB-3	NP_568309.2	Homeodomain	115..168	CDD:459649	23/57 (40%)
		HALZ	170..208	CDD:460477	5/27 (19%)