Protein Alignment lms and HB21

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_179445.1
• Gene: HB21 / 816370
• AraportID: AT2G18550
• Length: 220
• Species: Arabidopsis thaliana
• Alignment Length: 143
• Identity: 39/143 - (27%)
• Similarity: 64/143 - (44%)
• Gaps: 11/143 - (7%)

  Fly    76 DDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTK 140
            ::|||....||      .|..|::.||..||....|...::..||.:|.|...|:.:||||||.:
plant    54 NEGNGWFRKRK------LSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRAR 112

  Fly   141 WKRKYTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSI--MLNGSGSAAPMA 203
            ||.|...|..|...:.|....:   .:..:..:.:.|..|.......||.:  .:.|:.|.:|::
plant   113 WKNKRVEDEYTKLKNAYETTVV---EKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPIS 174

  Fly   204 SATTATGSPMRPY 216
            |:.|...:...|:
plant   175 SSVTIEANHTTPF 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	9/29 (31%)
		Homeodomain	87..143	CDD:459649	19/55 (35%)
HB21	NP_179445.1	HOX	61..114	CDD:197696	20/58 (34%)