Sequence 1: | NP_001286635.1 | Gene: | lms / 37322 | FlyBaseID: | FBgn0034520 | Length: | 378 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_072158.1 | Gene: | Vax1 / 64571 | RGDID: | 621132 | Length: | 336 | Species: | Rattus norvegicus |
Alignment Length: | 293 | Identity: | 86/293 - (29%) |
---|---|---|---|
Similarity: | 119/293 - (40%) | Gaps: | 70/293 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 SGRGGNCLGASRASSPATSSCLDDNMDDGKSDI-DLASDDGNGLGDDRKKRPRTAFSAAQIKALE 102
Fly 103 TEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSD-------VETLASHYYAQL 160
Fly 161 ----------GIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATGSPMRP 215
Fly 216 YATSGGMPP----LPGPSVMESARNAILARGQPLNFALPFGVAKPPAG---GVPAASY------I 267
Fly 268 PR-----CKPYATSYVDYAASLPTNESYLQMKY 295 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lms | NP_001286635.1 | Cnd2 | 33..>106 | CDD:303063 | 23/67 (34%) |
Homeobox | 89..142 | CDD:278475 | 30/52 (58%) | ||
Vax1 | NP_072158.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..39 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 50..69 | 4/14 (29%) | |||
vax upstream domain | 72..99 | 6/28 (21%) | |||
homeobox | 100..159 | 33/58 (57%) | |||
Homeobox | 103..156 | CDD:278475 | 30/52 (58%) | ||
vax downstream domain | 178..189 | 1/10 (10%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 236..267 | 10/54 (19%) | |||
vax terminal domain | 315..323 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166351393 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |