Protein Alignment lms and drgx

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001032182.1
• Gene: drgx / 560399
• ZFINID: ZDB-GENE-070330-1
• Length: 287
• Species: Danio rerio
• Alignment Length: 309
• Identity: 69/309 - (22%)
• Similarity: 111/309 - (35%)
• Gaps: 99/309 - (32%)

  Fly    79 NGLG-------DD-----RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIK 131
            ||.|       ||     :::|.||.|:..|::|||..|.:..|..|..|..||.::.|||.:::
Zfish    23 NGFGNHASGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQ 87

  Fly   132 IWFQNRRTKWKR--KYTSDVETLASHYYAQLGIGGLAR------------------------PM- 169
            :||||||.||::  :.||:.:            ||..:                        ||
Zfish    88 VWFQNRRAKWRKTERGTSEQD------------GGKEQMNEGNPPARNLNQSPVDHSRSKKEPME 140

  Fly   170 -------VVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATGSPMRPYATSGGMPPLPG 227
                   |||      |..|..|:.:...:||.:..|..::...|..|||:....       :|.
Zfish   141 LQQNINRVVG------SGGPFFPSCLPGTLLNTATYAQALSQVATLKGSPLCSCC-------VPD 192

  Fly   228 PSVMESARNAILARGQPLNFALPFGVAKPPAGGVPAASYIPRCKPYATSYVDYAASLPTNESYLQ 292
            |              ..|:|..|:|........|.|...  :.:.::.:.:..|..|.|..:...
Zfish   193 P--------------MGLSFLPPYGCQSNRTASVAALRM--KAREHSEAVLQSANLLGTGSTTGP 241

  Fly   293 MKYATLPPEAESGASNGLAELERVFGDANANFLQQRSTPVAGTATAYGH 341
            .....||....:|            ||::.|....:.|.:..|...:.|
Zfish   242 AAGPALPLSQNTG------------GDSSPNSSTPKITSLRRTPDKHLH 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	13/38 (34%)
		Homeodomain	87..143	CDD:459649	25/55 (45%)
drgx	NP_001032182.1	Homeodomain	43..99	CDD:459649	25/55 (45%)
		OAR	207..224	CDD:461067	2/18 (11%)