DRSC/TRiP Functional Genomics Resources

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Protein Alignment lms and BARX1

DIOPT Version :10

Sequence 1:NP_611491.2 Gene:lms / 37322 FlyBaseID:FBgn0034520 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_067545.3 Gene:BARX1 / 56033 HGNCID:955 Length:254 Species:Homo sapiens


Alignment Length:76 Identity:30/76 - (39%)
Similarity:44/76 - (57%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKI 132
            :..::.|.....|....:.:|.||.|:..|:..||..||:.||||...|..||:.|.|::.|:|.
Human   124 RGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKT 188

  Fly   133 WFQNRRTKWKR 143
            |:||||.|||:
Human   189 WYQNRRMKWKK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmsNP_611491.2 Cnd2 33..>106 CDD:450400 9/37 (24%)
Homeodomain 87..143 CDD:459649 27/55 (49%)
BARX1NP_067545.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Homeodomain 143..199 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..254
Blue background indicates that the domain is not in the aligned region.

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