Protein Alignment lms and barhl1a

DIOPT Version :9

• Sequence 1: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001017712.2
• Gene: barhl1a / 550407
• ZFINID: ZDB-GENE-050417-212
• Length: 299
• Species: Danio rerio
• Alignment Length: 236
• Identity: 78/236 - (33%)
• Similarity: 104/236 - (44%)
• Gaps: 45/236 - (19%)

  Fly     8 RRYPHSFSIEQILA--KP----EMRSSTSFEDSVQDESGRGGNCLGASRASSPATSSCLDDNMDD 66
            |....||.|..|||  ||    ...|||.  .|.||..    :|:....::|.:.|..  ...|:
Zfish    80 RTVTSSFLIRDILADCKPLAACAPYSSTG--QSAQDAE----DCMDKLHSNSSSDSEY--RVKDE 136

  Fly    67 GKSDIDLASDDGNGLGDDRKKRP---RTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTET 128
            ...:|..:.|..|    .|.|:|   ||||:..|:..||..|||.|||||..|..||..|.||:|
Zfish   137 ADREISSSRDSPN----SRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDT 197

  Fly   129 QIKIWFQNRRTKWKRKYTSDVETLAS--------------HYYAQLGIGGLARPMVVGDRLWLFS 179
            |:|.|:|||||||||:....:|.||.              ::|.|    .|...:..|..|:|:.
Zfish   198 QVKTWYQNRRTKWKRQTAVGLELLAEAGNYSALQRMFPSPYFYPQ----SLVSNLDPGPGLYLYR 258

  Fly   180 QTPTGPTPIQ-----SIMLNG-SGSAAPMASATTATGSPMR 214
            .....|.|:|     .|:|:| .|...|.:.:......|.|
Zfish   259 GPSAPPPPVQRPLVPRILLHGLQGGGDPASLSGVIPRHPPR 299

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	20/75 (27%)
		Homeobox	89..142	CDD:278475	32/55 (58%)
barhl1a	NP_001017712.2	TPP_enzymes	<122..177	CDD:294952	18/60 (30%)
		Homeobox	159..211	CDD:278475	31/51 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_116541
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810