Protein Alignment lms and Hmx

DIOPT Version :9

• Sequence 1: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001262674.1
• Gene: Hmx / 42110
• FlyBaseID: FBgn0264005
• Length: 718
• Species: Drosophila melanogaster
• Alignment Length: 375
• Identity: 96/375 - (25%)
• Similarity: 137/375 - (36%)
• Gaps: 118/375 - (31%)

  Fly     5 SAVRRYPHSFSIEQILAKPEMRSSTSFEDSVQDESGRGGNCLGASRASSPATSSCL--DDNMDDG 67
            |::..:||          |.:..|            .||..|.:|...|......:  :|:..||
  Fly   410 SSLTHHPH----------PHLTGS------------HGGYLLPSSSNESDEEGEEIIEEDDGTDG 452

  Fly    68 KSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKI 132
            .||......|||   ..|||:.||.||.||:..||:.|:..:|||.::|..||..|:|||||:||
  Fly   453 PSDSSSPHGDGN---SKRKKKTRTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKI 514

  Fly   133 WFQNRRTKWKRKYTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSG 197
            ||||||.||||:..:::|.           ..:|.......||            ::..:|...|
  Fly   515 WFQNRRNKWKRQLAAELEA-----------ANMANMAHAAQRL------------VRVPVLYHDG 556

  Fly   198 SAAPMASATTATGSPMRPYA----TSGGMPPLPGPSVMESARNAILARGQPLNFALPFGVAKPPA 258
            :.|...........||:.||    ||...|||           :.|..|.......|..:.|||
  Fly   557 TTAGFVPPPPPHHHPMQYYAAARNTSPPRPPL-----------SSLVXGVGCLATAPMSLLKPP- 609

  Fly   259 GGVPAASYIPRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAESGASNGLAELERVFGDANAN 323
               .:.::.|..:|                          ||.|..
  Fly   610 ---NSMAHPPHPQP--------------------------PPPAPL------------------- 626

  Fly   324 FLQQRSTPVAGTATAYGHDGLNQAQRSRRPTQSESECSDIDCEHLDEDEE 373
            .:||||.......|....|..::.:||.   ..:.|.:.||.| .||::|
  Fly   627 HMQQRSFLGCEQLTETDMDSDSEQERSH---MMDDEDAAIDVE-ADEEQE 672

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	24/74 (32%)
		Homeobox	89..142	CDD:278475	30/52 (58%)
Hmx	NP_001262674.1	Homeobox	471..524	CDD:278475	30/52 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D858478at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.920