Protein Alignment lms and NK7.1

DIOPT Version :9

• Sequence 1: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001247103.1
• Gene: NK7.1 / 41747
• FlyBaseID: FBgn0024321
• Length: 721
• Species: Drosophila melanogaster
• Alignment Length: 405
• Identity: 108/405 - (26%)
• Similarity: 159/405 - (39%)
• Gaps: 73/405 - (18%)

  Fly    16 IEQILAKPEMRSSTSFEDSV-------QDESGRGGNCLGASRASSPATSSCLDDNMDDGKSDIDL 73
            :...:|.|...|.|...||:       .:.|..|.|.....::::.:|....:|:.|.|.:|.
  Fly   328 LSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNANSTLETTEDDSDSGSTDA-- 390

  Fly    74 ASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRR 138
                      .|||:.||.|:..||..||..||..||||.::||.:||.|.:||||:||||||||
  Fly   391 ----------RRKKKARTTFTGRQIFELEKMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRR 445

  Fly   139 TKWKRKYTSDVETLASH--YYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAP 201
            ||||::........|.|  ..|:.|..|.|.....|:.....|...|.||         .|:||.
  Fly   446 TKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTPSGEPTDKRSSNATSPT---------VGNAAT 501

  Fly   202 MASATTATGSPMR-------------PYATSGGMPPLPGPSVMESARNAILARG-QPLNFA---- 248
            :|....:..||.|             ...:.|.:|.....:.::...||:|.:. :..|.|
  Fly   502 IAEIKKSPKSPNRGSNNNNNNTLNNNVNNSEGKVPAKQSTTKIKKQLNALLEKTVKTANQAHRSA 566

  Fly   249 -LPFGVAKPPAGGVPAAS-----YIPRCKPYATSY-VDYAASLPTNESYLQMKYATLPPEAE--- 303
             |.....||.....|..|     ...|...:|... |:.||.|...|. |.:|....|...|
  Fly   567 ELESSDQKPAVEKRPNNSNENQLLHQRLHQHAIPLTVEPAAPLEQTEK-LDIKREESPQHRELQL 630

  Fly   304 ----SGASNG-LAELERVFGDANANFLQQRSTPVAGTATAYGHDGLNQAQRSRRPTQSESECSDI 363
                :...|| |.|::         |..:.:......|.|..:..:...:|.:..:.|.....|.
  Fly   631 SLQRAAIQNGQLTEMD---------FESKLAASKISIALAMANKQMQPEKRVKTESSSSEGEGDG 686

  Fly   364 DCEHLDEDEEPPAAE 378
            |.|..:|:||..::|
  Fly   687 DGEEEEEEEEVSSSE 701

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	20/79 (25%)
		Homeobox	89..142	CDD:278475	32/52 (62%)
NK7.1	NP_001247103.1	Homeobox	397..449	CDD:278475	32/51 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D858478at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.920