Protein Alignment lms and vax1

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_919391.2
• Gene: vax1 / 373870
• ZFINID: ZDB-GENE-030904-9
• Length: 317
• Species: Danio rerio
• Alignment Length: 282
• Identity: 94/282 - (33%)
• Similarity: 129/282 - (45%)
• Gaps: 45/282 - (15%)

  Fly    27 SSTSFEDSVQDESGRGG--NCLGASRASSPATSSCLDDNMDDGKSDI-DLASDDGNGLGDDRKKR 88
            |.|..:|..:..|..|.  || ..|||||.....|....:.|.|..| ::...  .||..||.||
Zfish    33 SKTFLKDQQESFSPSGAVENC-EKSRASSGDPDYCRRILVRDAKGSIREIILP--KGLDLDRPKR 94

  Fly    89 PRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDVE--T 151
            .||:|:|.|:..||.||:|.:|:...:||.||:||.|:|||:|:||||||||.|:....|.|  :
Zfish    95 TRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQGKDSELRS 159

  Fly   152 LASHYYAQLGI------GGLARPMVVGDRLWLFSQTPTGPT---PIQSIMLNG---SGSAAPMAS 204
            :.|...|...:      |.|..|..:...|.....:..|..   |...|..||   |.|::...|
Zfish   160 VVSETAATCSVLRLLEQGRLLTPPGLPGLLPHCGSSSLGSALRGPSLGITANGGSSSSSSSSAGS 224

  Fly   205 ATTATGSPMRPYATSG-------GMPP------LPGPSVMESARNAILARGQPLNFALPFGVAKP 256
            :.||.|||..|..||.       |.||      .|.||::.|..:.|        .:.|.|:|..
Zfish   225 SGTAGGSPPLPTVTSSGTVTGLQGSPPAHGLFSFPMPSLLGSVASRI--------SSTPLGMAGS 281

  Fly   257 PAGGVP--AASYIPRC--KPYA 274
            .||.:.  :|.|:...  :||:
Zfish   282 LAGNLQELSARYLSSSAFEPYS 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	28/75 (37%)
		Homeodomain	87..143	CDD:459649	32/55 (58%)
vax1	NP_919391.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..62		12/29 (41%)
		Homeodomain	93..149	CDD:459649	32/55 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	203..248		15/44 (34%)