Protein Alignment lms and gsc

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_571092.1
• Gene: gsc / 30212
• ZFINID: ZDB-GENE-980528-2060
• Length: 240
• Species: Danio rerio
• Alignment Length: 209
• Identity: 51/209 - (24%)
• Similarity: 78/209 - (37%)
• Gaps: 76/209 - (36%)

  Fly    14 FSIEQILA-KPEMRSS-------------------TSFED-------------SVQDESGR---- 41
            |||:.||| :|..:.|                   |:..|             ::|..:||
Zfish     6 FSIDSILAGRPSCKDSVLLHRNAPVVFSNLTESLYTAAGDFNGLYSHTGPPAPNLQSVNGRIGYN 70

  Fly    42 -------------GGNCLGASRASSPATSSCLDDNMDD----------------------GKSDI 71
                         |..|.||..........|:....|.                      .::::
Zfish    71 NYYYGQLHVQGPTGPACCGAIPTLGSQQCPCIPTGYDSAGSVLISPVPHQMMSYMNVGTLSRTEL 135

  Fly    72 DLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQN 136
            .|.    |.|...||:|.||.|:..|::|||..|:..||..|..|..||:::.|.|.::::||:|
Zfish   136 QLL----NQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKN 196

  Fly   137 RRTKWKRKYTSDVE 150
            ||.||:|:..|..|
Zfish   197 RRAKWRRQKRSSSE 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	23/124 (19%)
		Homeodomain	87..143	CDD:459649	24/55 (44%)
gsc	NP_571092.1	Homeodomain	147..203	CDD:459649	24/55 (44%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	199..240		5/12 (42%)