Protein Alignment lms and VAX2

DIOPT Version :9

• Sequence 1: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_036608.1
• Gene: VAX2 / 25806
• HGNCID: 12661
• Length: 290
• Species: Homo sapiens
• Alignment Length: 235
• Identity: 74/235 - (31%)
• Similarity: 105/235 - (44%)
• Gaps: 50/235 - (21%)

  Fly    37 DESGRGGNC--------------------LGASRASSPATS--SCLDDNMDDGKSDID-----LA 74
            :..|.||.|                    :..:.|||||.|  |..|.:...|..:.|     |.
Human    17 ESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEADHCRRILV 81

  Fly    75 SDD---------GNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQI 130
            .|.         ..||..||.||.||:|:|.|:..||.||:|.:|:...:||.||:||.|:|||:
Human    82 RDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQV 146

  Fly   131 KIWFQNRRTKWKRKYTSDVETLASHYYAQ-LGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLN 194
            |:||||||||.|:..:.|:|..||...:: .....:.|.:..|..|    ..|..|:   .:.|.
Human   147 KVWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGRLL----SVPRAPS---LLALT 204

  Fly   195 GSGSAAPMASATTATGSP------MRPYATSGGMPPLPGP 228
            .|....|.:...|:.|.|      :.|.:::...||||.|
Human   205 PSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPPLPPP 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	30/104 (29%)
		Homeobox	89..142	CDD:278475	30/52 (58%)
VAX2	NP_036608.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..75		13/57 (23%)
		Homeobox	105..158	CDD:306543	30/52 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..240		6/34 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	90	1.000	Inparanoid score	I5115
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	2	1.960