Sequence 1: | NP_001286635.1 | Gene: | lms / 37322 | FlyBaseID: | FBgn0034520 | Length: | 378 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_665887.3 | Gene: | Lhx1 / 257634 | RGDID: | 71074 | Length: | 406 | Species: | Rattus norvegicus |
Alignment Length: | 309 | Identity: | 80/309 - (25%) |
---|---|---|---|
Similarity: | 117/309 - (37%) | Gaps: | 54/309 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 EDSVQDESGRGGNCL-GASRASSPATSSCLDDNMDDGKSDIDLAS----DDGNGLGDD-----RK 86
Fly 87 KRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDVET 151
Fly 152 LASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPI----QSIMLNGSGS------AAPMASAT 206
Fly 207 TATGSPMRPYATSGGMP------PLPG--PSVMESARNAILARGQPLNFALPFGVAKPPAGGVP- 262
Fly 263 -----AASYIPRCKPYATSYVDYAASLPTNESYLQMKYATLPPEAESGA 306 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lms | NP_001286635.1 | Cnd2 | 33..>106 | CDD:303063 | 21/82 (26%) |
Homeobox | 89..142 | CDD:278475 | 19/52 (37%) | ||
Lhx1 | NP_665887.3 | LIM1_Lhx1_Lhx5 | 4..55 | CDD:188753 | |
LIM2_Lhx1_Lhx5 | 63..118 | CDD:188761 | 1/1 (100%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 128..189 | 16/60 (27%) | |||
Homeobox | 183..237 | CDD:395001 | 19/53 (36%) | ||
dnaA | <263..>382 | CDD:237605 | 31/126 (25%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 294..372 | 21/85 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |