Protein Alignment lms and Prrx2

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: XP_006497869.1
• Gene: Prrx2 / 20204
• MGIID: 98218
• Length: 259
• Species: Mus musculus
• Alignment Length: 248
• Identity: 61/248 - (24%)
• Similarity: 99/248 - (39%)
• Gaps: 69/248 - (27%)

  Fly    13 SFSIEQILAKPEMRSSTSFEDSVQDESGR--GGNCLGASRASSPATSSCLDDNMDDGKSDIDLAS 75
            :||:..:|...|:.:           :||  .|...|.:.|...|..     ....|.|..:.|.
Mouse    32 NFSVSHLLDLEEVAA-----------AGRRAAGPVSGPAEAREGAAR-----EPSGGSSGSEAAP 80

  Fly    76 DDGN----GLGDDRKK---RPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQI--- 130
            .||:    |.|..|||   |.||.|:::|::|||..|||..|.....|..||:::.|:|.::
Mouse    81 QDGDCPSPGRGTKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQST 145

  Fly   131 ---------KIWFQNRRTKWKRKYTSDVET----LASHYYAQLGIGGLARPMVVGDRLWLFSQTP 182
                     ::||||||.|::|...:.:.|    |...|..:..|                 :.|
Mouse   146 RPCSPHSPSQVWFQNRRAKFRRNERAMLATRSASLLKSYGQEAAI-----------------EQP 193

  Fly   183 TGPTPIQSIMLNGSGSAAP--MASATTATGSPMRPYATSGGMPPLPGPSVMES 233
            ..|.|.         :.:|  ::...::..|.:.||:..|..|..||.::..|
Mouse   194 VAPRPT---------TMSPDYLSWPASSPYSSVPPYSPGGSSPATPGVNMANS 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	24/81 (30%)
		Homeodomain	87..143	CDD:459649	25/70 (36%)
Prrx2	XP_006497869.1	Homeodomain	103..167	CDD:459649	22/63 (35%)
		OAR	233..249	CDD:461067	1/5 (20%)