Protein Alignment lms and ceh-22

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001343841.1
• Gene: ceh-22 / 179485
• WormBaseID: WBGene00000445
• Length: 379
• Species: Caenorhabditis elegans
• Alignment Length: 233
• Identity: 64/233 - (27%)
• Similarity: 103/233 - (44%)
• Gaps: 61/233 - (26%)

  Fly    61 DDNMDDGKSDIDLASDDGNGLGDDRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQL 125
            |:.::|.::|     ::.:|.|..:|::.|..|:.||...||..|...||||..:|.|||.|::|
 Worm   202 DEILEDEEND-----EEDDGTGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRL 261

  Fly   126 TETQIKIWFQNRRTKWKRKYTSDVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQS 190
            |.||:||||||.|.|.|:.:|.                                      .||.:
 Worm   262 TPTQVKIWFQNHRYKTKKSHTD--------------------------------------KPINA 288

  Fly   191 IMLNGSGSAAPMASATTATGSPMRPYATSGGMPPLPGPSVM--ESARNAILARGQPLNFALPFGV 253
            .:|....:|  .:|.:||...|.|         .:|.|.::  .|||::.::...|  :.:.||.
 Worm   289 ALLTTMPNA--FSSQSTAASFPTR---------AMPIPMLVRDSSARSSDISSTSP--YTVAFGS 340

  Fly   254 AKPPAGGVPAAS-YIPRCKPYATSYVDYAASLPTNESY 290
            |.  :|.:|..| |:|....|.::....|:|..||..:
 Worm   341 AN--SGYLPTPSAYLPATSGYFSNGPSAASSYMTNTQW 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	12/44 (27%)
		Homeodomain	87..143	CDD:459649	28/55 (51%)
ceh-22	NP_001343841.1	Homeodomain	229..279	CDD:459649	27/49 (55%)