Protein Alignment lms and ceh-19

DIOPT Version :9

• Sequence 1: NP_001286635.1
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_001023142.1
• Gene: ceh-19 / 177590
• WormBaseID: WBGene00000442
• Length: 199
• Species: Caenorhabditis elegans
• Alignment Length: 265
• Identity: 72/265 - (27%)
• Similarity: 104/265 - (39%)
• Gaps: 107/265 - (40%)

  Fly    13 SFSIEQILAKPE--MRSSTSFEDSVQDESGRGGNCLGASRASSPATSSCLDDNMDDGKSDID--- 72
            :|:||.:|.|..  :.....||:  :::|.:.|.                :|..::.|:.||
 Worm     2 AFNIESLLEKKSNPVEEGNDFEE--ENDSEKNGE----------------EDEEEEEKNVIDGWT 48

  Fly    73 -----------LASDDGNG--------LGDDRKK-------------RPRTAFSAAQIKALETEF 105
                       :|:|....        ||...:|             :||.|:||.|:..|||||
 Worm    49 NMATSQLAMFAIANDLRTPTLVELQMLLGVSARKHDYKRSRKSVCERKPRQAYSARQLDRLETEF 113

  Fly   106 ERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDVETLASHYYAQLGIGGLARPMV 170
            :..|||||.||..|::.|.|||||||.||||||||||::.||.:                 |.||
 Worm   114 QTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQLTSSI-----------------RQMV 161

  Fly   171 VGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATGSPMRPYATSGGMPPLPGPSVMESAR 235
                    ...||                      :|:.|.|.:...|    ||.| |:.:....
 Worm   162 --------KDAPT----------------------STSVGVPFQSLLT----PPTP-PTTLACHV 191

  Fly   236 NAILA 240
            |::.|
 Worm   192 NSLFA 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_001286635.1	Cnd2	33..>106	CDD:303063	21/107 (20%)
		Homeobox	89..142	CDD:278475	35/52 (67%)
ceh-19	NP_001023142.1	Homeobox	97..150	CDD:278475	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910