Protein Alignment lms and Hoxc4

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: NP_038581.2
• Gene: Hoxc4 / 15423
• MGIID: 96195
• Length: 264
• Species: Mus musculus
• Alignment Length: 114
• Identity: 40/114 - (35%)
• Similarity: 55/114 - (48%)
• Gaps: 18/114 - (15%)

  Fly    47 GASRASSPATSSCLDDNMDDGKS---------------DIDLASDDGNGLGDDRKKRPRTAFSAA 96
            |.|.:.|||..:|.....|...|               .:...:.:.||   ...||.|||::..
Mouse   105 GTSASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNPNYNG---GEPKRSRTAYTRQ 166

  Fly    97 QIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKY 145
            |:..||.||...:||:..:|..:|..|.|:|.||||||||||.|||:.:
Mouse   167 QVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDH 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	19/73 (26%)
		Homeodomain	87..143	CDD:459649	29/55 (53%)
Hoxc4	NP_038581.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	19..130		8/24 (33%)
		Antp-type hexapeptide	135..140		0/4 (0%)
		Homeodomain	157..213	CDD:459649	29/55 (53%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	214..264		0/2 (0%)