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Protein Alignment lms and Hhex
DIOPT Version :10
| Sequence 1: | NP_611491.2 |
Gene: | lms / 37322 |
FlyBaseID: | FBgn0034520 |
Length: | 378 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_032271.1 |
Gene: | Hhex / 15242 |
MGIID: | 96086 |
Length: | 271 |
Species: | Mus musculus |
| Alignment Length: | 59 |
Identity: | 31/59 - (52%) |
| Similarity: | 39/59 - (66%) |
Gaps: | 0/59 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 85 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKR 143
::|..:..||..|...||.:||..||||..:|..|||.|||:|.|:|.||||||.||:|
Mouse 137 KRKGGQVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 195
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| lms | NP_611491.2 |
Cnd2 |
33..>106 |
CDD:450400 |
6/20 (30%) |
| Homeodomain |
87..143 |
CDD:459649 |
30/55 (55%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.