Protein Alignment lms and nkx3-2

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: XP_002940787.1
• Gene: nkx3-2 / 100497965
• XenbaseID: XB-GENE-876834
• Length: 329
• Species: Xenopus tropicalis
• Alignment Length: 224
• Identity: 67/224 - (29%)
• Similarity: 89/224 - (39%)
• Gaps: 62/224 - (27%)

  Fly    34 SVQDESGRGGNCLGASRASSP--ATSSCLDDNMDDGKSDIDLASDDGNGLGD------------- 83
            |.:.|.||.|: .|..:...|  |.:...|:....|.||.::    |.|:.|
 Frog   134 SEEGELGRPGD-TGERKKQRPLEARTKGEDEEETPGCSDCEI----GAGVPDPSPPDEDPKCEQL 193

  Fly    84 ------DRKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWK 142
                  .||||.|.|||.||:..||..|...:|||..:|..||..|:|||||:||||||||.|.|
 Frog   194 MLEPPKQRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTK 258

  Fly   143 RKYTS-------------DVETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLN 194
            |:..:             .|:.|......|...|.:.||.::               |:|:....
 Frog   259 RRQMAADLLAAAPAAKKVAVKVLVRDDQRQYQPGEVLRPSLL---------------PLQTPYFY 308

  Fly   195 GSGSAAPMASATTATGSPMRPYATSGGMP 223
            ....|.|        |..:...|.|||.|
 Frog   309 PYYCALP--------GWTLSAAACSGGTP 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	27/92 (29%)
		Homeodomain	87..143	CDD:459649	32/55 (58%)
nkx3-2	XP_002940787.1	Homeodomain	203..259	CDD:459649	32/55 (58%)