Protein Alignment lms and alx4

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: XP_004913406.1
• Gene: alx4 / 100493396
• XenbaseID: XB-GENE-853003
• Length: 376
• Species: Xenopus tropicalis
• Alignment Length: 337
• Identity: 83/337 - (24%)
• Similarity: 127/337 - (37%)
• Gaps: 84/337 - (24%)

  Fly     4 QSAVRRY-PHSFSIEQILAKPEMRSS--TSFEDSVQDESGRGGNCLGASRASSPATSSCLDDNMD 65
            |.:..:| .|..|.:|..:...|:|:  .|..||::.:...|...:......|..|.:.....||
 Frog    81 QGSFTKYQAHHPSHQQQQSHLYMQSTPCKSPSDSLKVQDSPGDPLIPCYAKESALTPNSDHQGMD 145

  Fly    66 DG----KSDIDLASDDGNGLGD------------DRKKRPRTAFSAAQIKALETEFERGKYLSVA 114
            .|    |......|.| .|.||            .:|:|.||.|::.|::.||..|::..|..|.
 Frog   146 SGYITSKETAGKGSQD-RGSGDLPMDKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVY 209

  Fly   115 KRTALAKQLQLTETQIKIWFQNRRTKW-KRKYTSDVETLASHY--------------YAQLGIGG 164
            .|..||.:..|||.::::||||||.|| ||:....::.:.:|:              |||
 Frog   210 AREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSSAYELPLLTRAENYAQ----- 269

  Fly   165 LARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTAT-GSPMRPYA---TSGGMP-- 223
            :..|..:|:                    ||.||..|.......| .|.|.|::   ::||:.
 Frog   270 IQNPSWIGN--------------------NGGGSPVPACVVPCDTVSSCMSPHSHPHSAGGVSEF 314

  Fly   224 ---PLPGPSVMESARNAILARGQPLNFALPFGVAKPPAGGVPAASYIPRCKPYATSYVDYAASLP 285
               |.||..|.::....:            ||.|   |.|.....|....:|...|....|..:.
 Frog   315 LSVPGPGAHVGQTHMGGL------------FGSA---AMGPGINGYDLNTEPDRKSSSIAALRMK 364

  Fly   286 TNESYLQMKYAT 297
            ..|....|.:||
 Frog   365 AKEHSAAMSWAT 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	22/88 (25%)
		Homeodomain	87..143	CDD:459649	24/56 (43%)
alx4	XP_004913406.1	COG5576	120..266	CDD:227863	40/146 (27%)
		Homeodomain	182..238	CDD:459649	24/55 (44%)
		OAR	352..370	CDD:461067	3/17 (18%)