Protein Alignment lms and nkx2-3

DIOPT Version :10

• Sequence 1: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Sequence 2: XP_002937234.1
• Gene: nkx2-3 / 100486189
• XenbaseID: XB-GENE-852996
• Length: 328
• Species: Xenopus tropicalis
• Alignment Length: 257
• Identity: 65/257 - (25%)
• Similarity: 96/257 - (37%)
• Gaps: 81/257 - (31%)

  Fly    32 EDSVQDESGR-GGNCLGASRASSPATSSCLDDNMDDGKSDIDLASDDGNGLGDDRKKRPRTAFSA 95
            ||..:::|.| |||            .||..:...||:..:    :|.:......:::||..||.
 Frog   107 EDEEEEDSLREGGN------------KSCFLNKSPDGEGKL----EDPDRPKQRSRRKPRVLFSQ 155

  Fly    96 AQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDVETLASHYYAQL 160
            ||:..||..|::.:|||..:|..||..|:||.||:||||||||.|.||:.......:.:|:
 Frog   156 AQVFELERRFKQQRYLSAPEREHLANSLKLTSTQVKIWFQNRRYKCKRQRQDKSLEMGTHH---- 216

  Fly   161 GIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGSGSAAPMASATTATGSPMRPYATSGGMPPL 225
                                    |.|.:.:.:                     |.....|.|.:
 Frog   217 ------------------------PPPPRRVAV---------------------PVLVRDGKPCI 236

  Fly   226 PGPSVMESARNAILARGQPLNFALPFGVAKPPAGGVPAASYIPRCKPYATSYVDYAASLPTN 287
            .|.....:|.|..         |.|:..     ...||.|| .....|.|:|....||:|:|
 Frog   237 GGSQSYNTAYNVT---------ASPYSY-----NSYPAYSY-NNSPSYNTNYNCNYASIPSN 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	19/73 (26%)
		Homeodomain	87..143	CDD:459649	29/55 (53%)
nkx2-3	XP_002937234.1	Homeodomain	147..203	CDD:459649	29/55 (53%)